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IMGVR_UViG_3300018021_000077-3300018021-Ga0187882_100539625
Arc-VirIMGVR_UViG_3300018021_000077-3300018021-Ga0187882_100539625
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-84
Domain cluster:
rep: PH2015_20_scaffold_1_prodigal-single.1__X__X__00198__D1-65
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k1lA02 | 3.30.457.30 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.69 | 40.0 | 3.95e-01 | 72.0% | 53.3% |
| 8agaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 41.0 | 3.52e-01 | 98.8% | 44.4% |
| 1kb0A01 | 2.140.10.10 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily | 0.58 | 49.0 | 2.99e-01 | 96.3% | 35.1% |
| 4czxA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 40.0 | 2.68e-01 | 89.0% | 18.2% |
| 4g9yA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 40.0 | 3.40e-01 | 98.8% | 45.6% |
| 7lt2A01 | 3.30.460.90 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.56 | 41.0 | 3.00e-01 | 79.3% | 66.5% |
| 2cnxA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 43.0 | 2.91e-01 | 82.9% | 41.8% |
| 3vgzC00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 44.0 | 2.96e-01 | 86.6% | 30.7% |
| 2f2eA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 40.0 | 3.88e-01 | 100.0% | 69.2% |
| 1erjB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 44.0 | 2.91e-01 | 89.0% | 96.0% |
| 4boeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 40.0 | 3.35e-01 | 81.7% | 62.3% |
| 1jmxB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 41.0 | 2.74e-01 | 86.6% | 20.1% |
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.53 | 39.0 | 4.00e-01 | 76.8% | 98.7% |
| 1knzA02 | 3.30.70.1610 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 27.0 | 3.22e-01 | 81.7% | 73.1% |
| 4nsxA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 42.0 | 2.81e-01 | 92.7% | 23.2% |
| 2a1vA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.51 | 43.0 | 3.66e-01 | 95.1% | 92.0% |
| 3llcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 40.0 | 2.91e-01 | 89.0% | 69.3% |
| 2eshA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 41.0 | 3.71e-01 | 98.8% | 64.0% |
| 3nraA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 35.0 | 2.87e-01 | 74.4% | 76.9% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3271939 | 206.1.3.24 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_lig_T4_1 | 0.77 | 69.0 | 4.68e-01 | 98.8% | 95.9% |
| 3198748 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.65 | 45.0 | 3.71e-01 | 73.2% | 72.0% |
| 5058434 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.62 | 41.0 | 3.53e-01 | 95.1% | 43.1% |
| 3602012 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.62 | 37.0 | 3.97e-01 | 79.3% | 68.6% |
| 3838246 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 41.0 | 3.67e-01 | 89.0% | 50.9% |
| 3269608 | 325.1.7.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H | 0.61 | 42.0 | 3.68e-01 | 72.0% | 69.7% |
| 5082589 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.60 | 40.0 | 4.10e-01 | 93.9% | 70.0% |
| 3576759 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 35.0 | 3.80e-01 | 72.0% | 67.1% |
| 3223920 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 37.0 | 3.91e-01 | 78.0% | 68.0% |
| 3837325 | 5.1.4.261 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, EIF3I | 0.60 | 45.0 | 2.94e-01 | 79.3% | 28.3% |
| 3472161 | 5.1.4.261 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, EIF3I | 0.59 | 44.0 | 2.94e-01 | 79.3% | 24.7% |
| 3933159 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 43.0 | 2.90e-01 | 89.0% | 20.1% |
| 3258352 | 5.1.4.284 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, EIF3I | 0.59 | 44.0 | 2.93e-01 | 79.3% | 23.9% |
| 5040871 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 42.0 | 4.31e-01 | 100.0% | 77.5% |
| 3782154 | 5.1.4.254 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N | 0.58 | 46.0 | 2.91e-01 | 82.9% | 23.5% |
| 5016457 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 39.0 | 3.89e-01 | 98.8% | 65.9% |
| 3566296 | 5.1.4.254 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N | 0.58 | 45.0 | 2.90e-01 | 82.9% | 23.5% |
| 4000510 | 5.1.4.261 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, EIF3I | 0.58 | 43.0 | 2.88e-01 | 79.3% | 24.3% |
| 5036720 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.57 | 37.0 | 3.67e-01 | 87.8% | 63.1% |
| 3388122 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 40.0 | 3.78e-01 | 89.0% | 62.1% |
| 3709555 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.57 | 37.0 | 4.32e-01 | 95.1% | 100.0% |
| 4651301 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.57 | 41.0 | 3.69e-01 | 97.6% | 54.8% |
| 5006277 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.56 | 30.0 | 3.63e-01 | 72.0% | 83.7% |
| 3954543 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.56 | 39.0 | 3.28e-01 | 100.0% | 42.0% |
| 4019710 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 46.0 | 3.04e-01 | 87.8% | 22.6% |
| 3204139 | 4099.1.1.2 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 | 0.55 | 39.0 | 2.86e-01 | 73.2% | 38.2% |
| 4115593 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.55 | 43.0 | 2.93e-01 | 85.4% | 89.2% |
| 3459220 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.54 | 43.0 | 2.95e-01 | 95.1% | 22.8% |
| 3594005 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 42.0 | 3.36e-01 | 100.0% | 42.4% |
| 4955531 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.53 | 42.0 | 2.95e-01 | 89.0% | 91.3% |
| 3517217 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 42.0 | 2.74e-01 | 85.4% | 23.2% |
| 4308955 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.53 | 41.0 | 3.74e-01 | 97.6% | 62.7% |
| 4020886 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.53 | 43.0 | 3.53e-01 | 89.0% | 68.7% |
| 4934352 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.52 | 40.0 | 3.17e-01 | 98.8% | 38.9% |
| 3937192 | 5.1.11.27 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Det1 | 0.52 | 42.0 | 2.80e-01 | 91.5% | 25.3% |
| 4027489 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 45.0 | 2.85e-01 | 95.1% | 28.7% |
| 3653935 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.52 | 39.0 | 2.69e-01 | 92.7% | 20.6% |
| 6659 | 4350.1.1.1 ↗ | a+b two layers › PG1388-like › PG1388-like › PG1388-like › DUF3256 | 0.52 | 37.0 | 2.85e-01 | 75.6% | 39.1% |
| 4955415 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 42.0 | 3.85e-01 | 100.0% | 67.6% |
| 3204558 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.52 | 38.0 | 2.99e-01 | 76.8% | 51.8% |
| 5073413 | 211.1.1.24 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Ble-like_N | 0.52 | 31.0 | 3.67e-01 | 75.6% | 89.1% |
| 5077064 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.52 | 43.0 | 3.02e-01 | 96.3% | 93.1% |
| 3640359 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 43.0 | 2.70e-01 | 91.5% | 35.3% |
| 4015526 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.51 | 40.0 | 2.91e-01 | 82.9% | 41.1% |
| 3786637 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.51 | 39.0 | 2.98e-01 | 84.1% | 48.8% |
| 3800122 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.51 | 43.0 | 3.48e-01 | 96.3% | 71.4% |
| 6641 | 241.11.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR | 0.51 | 43.0 | 3.72e-01 | 95.1% | 96.2% |
| 3257782 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 33.0 | 3.31e-01 | 79.3% | 61.8% |
| 3203216 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.51 | 37.0 | 3.16e-01 | 78.0% | 46.8% |
| 3604748 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 39.0 | 2.93e-01 | 100.0% | 32.6% |