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IMGVR_UViG_3300018021_000339-3300018021-Ga0187882_10167652
Arc-VirIMGVR_UViG_3300018021_000339-3300018021-Ga0187882_10167652
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 41-191
Domain cluster:
rep: IMGVR_UViG_3300020139_000054-3300020139-Ga0197143_10042646__D29-208
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.83 | 79.0 | 6.93e-01 | 98.7% | 75.2% |
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.77 | 73.0 | 6.33e-01 | 100.0% | 90.9% |
| 3l0aA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.77 | 72.0 | 5.90e-01 | 100.0% | 80.8% |
| 3syyA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.77 | 72.0 | 6.56e-01 | 100.0% | 87.6% |
| 5zyuA01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.75 | 71.0 | 6.38e-01 | 100.0% | 97.0% |
| 3sm4A00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.72 | 67.0 | 5.81e-01 | 100.0% | 81.8% |
| 1gefA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.70 | 45.0 | 5.03e-01 | 70.9% | 80.8% |
| 1i74A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.62 | 33.0 | 3.69e-01 | 82.8% | 64.7% |
| 5t5sA01 | 3.10.310.40 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.55 | 29.0 | 3.14e-01 | 80.8% | 57.4% |
| 5d8nA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.52 | 36.0 | 3.41e-01 | 70.9% | 65.4% |
| 2i62A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 38.0 | 3.24e-01 | 78.8% | 99.2% |
| 3m7vA02 | 3.30.70.1250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phosphopentomutase | 0.50 | 35.0 | 3.84e-01 | 84.8% | 87.6% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928680 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.86 | 77.0 | 6.98e-01 | 100.0% | 73.2% |
| 5012863 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.85 | 81.0 | 7.32e-01 | 100.0% | 87.7% |
| 3268889 | 2008.1.1.29 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Dna2 | 0.83 | 79.0 | 5.99e-01 | 100.0% | 80.3% |
| 5012280 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.81 | 77.0 | 6.84e-01 | 100.0% | 80.5% |
| 5025064 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.76 | 72.0 | 6.06e-01 | 100.0% | 83.7% |
| 5081063 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.76 | 72.0 | 6.25e-01 | 100.0% | 86.4% |
| 3194723 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.76 | 71.0 | 5.34e-01 | 99.3% | 84.5% |
| 3945442 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.75 | 70.0 | 6.30e-01 | 100.0% | 88.3% |
| 424674 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.75 | 69.0 | 5.98e-01 | 100.0% | 79.0% |
| 5029815 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.75 | 70.0 | 6.15e-01 | 100.0% | 90.7% |
| 3588071 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.75 | 68.0 | 6.72e-01 | 96.0% | 99.4% |
| None | — | 0.74 | 69.0 | 5.63e-01 | 99.3% | 80.0% | |
| 4932843 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.74 | 69.0 | 5.81e-01 | 100.0% | 84.9% |
| 4242672 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.74 | 69.0 | 6.24e-01 | 100.0% | 89.0% |
| 5033908 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.73 | 68.0 | 6.10e-01 | 100.0% | 90.2% |
| 4999640 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.72 | 67.0 | 5.98e-01 | 100.0% | 88.6% |
| 4991290 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 62.0 | 5.10e-01 | 96.7% | 80.8% |
| 3499164 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 60.0 | 4.73e-01 | 100.0% | 73.9% |
| 3710451 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.64 | 58.0 | 4.51e-01 | 100.0% | 70.3% |
| 3698600 | 2008.1.1.18 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › eIF-3_zeta | 0.64 | 59.0 | 4.40e-01 | 100.0% | 71.9% |
| 3243708 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.63 | 57.0 | 4.42e-01 | 100.0% | 71.0% |
| 3628154 | 2008.1.1.91 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NARG2_C | 0.63 | 57.0 | 4.47e-01 | 100.0% | 65.2% |
| 5024562 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.60 | 42.0 | 4.46e-01 | 71.5% | 100.0% |
| 5063524 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.59 | 51.0 | 5.01e-01 | 100.0% | 85.4% |
| 3472668 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.57 | 41.0 | 3.73e-01 | 74.2% | 87.1% |
| 3477161 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.54 | 34.0 | 3.45e-01 | 83.4% | 62.7% |
| 3486967 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.54 | 34.0 | 3.43e-01 | 83.4% | 62.7% |
| 3426978 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.51 | 38.0 | 3.18e-01 | 78.8% | 95.6% |