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IMGVR_UViG_3300018024_000109-3300018024-Ga0187881_1000907216

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300018024_000109-3300018024-Ga0187881_1000907216 ↗
Kingdom:: archaea

Quality

93.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 107-181

PDB

Domain cluster: representative

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2vugA03	3.30.470.30	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme	0.74	67.0	6.05e-01	100.0%	76.5%
1s68A02	3.30.470.30	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme	0.73	65.0	5.70e-01	100.0%	75.2%
6imjA01	3.30.470.30	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme	0.69	62.0	4.61e-01	100.0%	43.6%
3l2pA03	3.30.470.30	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme	0.66	59.0	5.04e-01	100.0%	78.3%
4pqxA01	2.40.50.500	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain	0.58	48.0	4.92e-01	93.3%	94.5%
3tufB00	2.70.70.10	Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA)	0.52	38.0	3.06e-01	78.7%	91.8%
3fhwA00	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.52	46.0	4.26e-01	100.0%	96.0%
1eovA01	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.51	44.0	3.73e-01	100.0%	67.9%
2nvaA01	2.40.37.10	Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1	0.50	36.0	3.11e-01	78.7%	81.2%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3328725	206.1.3.1 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M	0.68	61.0	4.46e-01	100.0%	48.0%
3250994	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.63	48.0	5.08e-01	97.3%	95.4%
3734729	206.1.3.0 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp	0.59	50.0	3.60e-01	100.0%	35.1%
3610536	206.1.3.0 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp	0.58	50.0	3.41e-01	100.0%	32.2%
3791017	210.2.1.1 ↗	a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C	0.53	44.0	2.94e-01	96.0%	58.6%
3267878	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.52	44.0	4.21e-01	100.0%	82.2%
3362029	5.1.4.8 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH	0.51	41.0	2.66e-01	86.7%	28.5%
3509704	922.1.1.20 ↗	few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › PF28734	0.51	42.0	3.85e-01	100.0%	91.8%
3205674	206.1.1.14 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1	0.50	38.0	2.66e-01	100.0%	21.7%

D2 medium residues 1-98

PDB

Domain cluster: rep: PH2015_20_scaffold_1_prodigal-single.1__X__X__00198__D1-65