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IMGVR_UViG_3300018026_000435-3300018026-Ga0187857_1000153837
Arc-VirIMGVR_UViG_3300018026_000435-3300018026-Ga0187857_1000153837
Identity
- Kingdom:
- archaea
Quality
76.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-69
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gzaA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.69 | 53.0 | 4.48e-01 | 80.6% | 87.0% |
| 2enpA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.67 | 48.0 | 3.75e-01 | 76.1% | 85.0% |
| 1p9rA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.66 | 49.0 | 4.21e-01 | 80.6% | 99.1% |
| 4cbvA02 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.66 | 48.0 | 4.05e-01 | 79.1% | 52.5% |
| 3bs1A00 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.66 | 48.0 | 4.22e-01 | 79.1% | 65.0% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 39.0 | 4.44e-01 | 100.0% | 83.3% |
| 2z0lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.64 | 56.0 | 3.69e-01 | 100.0% | 41.6% |
| 1ynjJ02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.63 | 49.0 | 5.08e-01 | 95.5% | 93.5% |
| 2z4hA02 | 2.40.50.540 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NlpE, C-terminal domain | 0.63 | 55.0 | 5.11e-01 | 100.0% | 89.5% |
| 3d31A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 41.0 | 4.66e-01 | 95.5% | 100.0% |
| 3hslX00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.62 | 54.0 | 3.60e-01 | 100.0% | 43.6% |
| 2wfwA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 47.0 | 4.95e-01 | 100.0% | 98.3% |
| 3d3rA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 46.0 | 4.31e-01 | 89.6% | 66.3% |
| 3u4zA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 52.0 | 4.50e-01 | 100.0% | 75.2% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 50.0 | 4.42e-01 | 100.0% | 63.7% |
| 2q18X01 | 3.10.330.40 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.59 | 34.0 | 3.37e-01 | 91.0% | 54.3% |
| 1nnxA00 | 2.40.50.200 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Bacterial OB-fold | 0.58 | 49.0 | 4.49e-01 | 98.5% | 73.1% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.58 | 41.0 | 4.36e-01 | 98.5% | 87.9% |
| 3hrsA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.58 | 42.0 | 4.04e-01 | 100.0% | 68.4% |
| 2ix2A01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.57 | 49.0 | 3.50e-01 | 100.0% | 43.4% |
| 1ckmA01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.56 | 48.0 | 3.77e-01 | 100.0% | 89.7% |
| 1b9mB02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.56 | 40.0 | 3.98e-01 | 86.6% | 73.6% |
| 4msxA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 37.0 | 2.44e-01 | 98.5% | 15.6% |
| 1d8hA00 | 3.20.100.10 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like | 0.55 | 38.0 | 2.55e-01 | 73.1% | 31.6% |
| 2bc0A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 46.0 | 3.21e-01 | 92.5% | 53.0% |
| 1c48A00 | 2.40.50.70 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 46.0 | 4.59e-01 | 100.0% | 98.6% |
| 3n7zB03 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.55 | 38.0 | 3.39e-01 | 71.6% | 76.8% |
| 2lssA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 46.0 | 4.58e-01 | 98.5% | 98.6% |
| 4v02C00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.55 | 37.0 | 3.10e-01 | 100.0% | 38.5% |
| 2jaeA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 44.0 | 3.23e-01 | 91.0% | 61.1% |
| 3igfA02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 46.0 | 4.47e-01 | 95.5% | 89.2% |
| 3cp0A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 43.0 | 4.45e-01 | 100.0% | 96.8% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 37.0 | 3.78e-01 | 100.0% | 75.4% |
| 1jllB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 43.0 | 3.39e-01 | 94.0% | 67.7% |
| 3oc4B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 43.0 | 3.18e-01 | 92.5% | 42.9% |
| 5bulA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 42.0 | 2.65e-01 | 92.5% | 51.0% |
| 6lofA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.52 | 45.0 | 3.45e-01 | 100.0% | 96.9% |
| 3aupD01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.51 | 39.0 | 2.94e-01 | 86.6% | 84.0% |
| 3g7sA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.51 | 38.0 | 2.41e-01 | 83.6% | 81.3% |
| 2fn0B00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.51 | 45.0 | 2.80e-01 | 100.0% | 66.3% |
| 4pn0C00 | 3.20.100.10 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like | 0.51 | 43.0 | 2.96e-01 | 97.0% | 89.8% |
| 3r1kA03 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.51 | 34.0 | 3.13e-01 | 71.6% | 78.1% |
| 6melB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.50 | 43.0 | 3.38e-01 | 100.0% | 69.7% |
| 3k6oA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.50 | 42.0 | 4.17e-01 | 100.0% | 97.3% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.74 | 55.0 | 3.35e-01 | 79.1% | 30.8% | |
| 3388100 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.69 | 51.0 | 3.17e-01 | 80.6% | 25.4% |
| 3967995 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.69 | 51.0 | 3.14e-01 | 80.6% | 24.7% |
| 3497738 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.67 | 46.0 | 3.67e-01 | 71.6% | 66.2% |
| 3401205 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 47.0 | 2.80e-01 | 76.1% | 15.7% |
| 1082804 | 227.1.1.13 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Herpes_DNAp_acc | 0.64 | 56.0 | 4.41e-01 | 100.0% | 84.9% |
| 4360971 | 2.1.1.293 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF27162 | 0.61 | 52.0 | 5.30e-01 | 100.0% | 100.0% |
| 5079518 | 2.1.1.83 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N | 0.61 | 42.0 | 4.66e-01 | 88.1% | 96.0% |
| 4263787 | 2.1.1.293 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF27162 | 0.61 | 51.0 | 5.22e-01 | 95.5% | 98.5% |
| 5078464 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 35.0 | 4.04e-01 | 94.0% | 84.4% |
| 4063004 | 2.1.1.84 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_N | 0.60 | 46.0 | 3.72e-01 | 100.0% | 40.7% |
| 1515939 | 244.1.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase | 0.60 | 41.0 | 2.66e-01 | 70.1% | 15.7% |
| 3964220 | 2.2.1.0 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins | 0.59 | 50.0 | 4.63e-01 | 100.0% | 84.4% |
| 4177859 | 2.1.1.84 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_N | 0.58 | 44.0 | 4.46e-01 | 98.5% | 86.2% |
| 3784151 | 225.1.1.7 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 | 0.58 | 42.0 | 3.05e-01 | 79.1% | 80.5% |
| 3417269 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.58 | 50.0 | 4.17e-01 | 100.0% | 64.8% |
| 3181584 | 884.1.1.0 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain | 0.58 | 40.0 | 3.38e-01 | 71.6% | 42.6% |
| 3660442 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.58 | 37.0 | 2.39e-01 | 95.5% | 14.0% |
| 3476052 | 2.1.1.142 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HROB | 0.58 | 49.0 | 3.90e-01 | 100.0% | 52.7% |
| 3192436 | 220.1.1.129 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Swc3 | 0.58 | 41.0 | 3.14e-01 | 77.6% | 83.4% |
| 4332020 | 2.1.1.84 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_N | 0.58 | 43.0 | 3.95e-01 | 95.5% | 61.1% |
| 4282601 | 2.1.1.84 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_N | 0.57 | 45.0 | 3.96e-01 | 100.0% | 55.5% |
| 3285086 | 3268.1.1.0 ↗ | a+b two layers › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase | 0.57 | 41.0 | 4.00e-01 | 76.1% | 97.3% |
| 4043601 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.57 | 46.0 | 4.72e-01 | 100.0% | 96.9% |
| 3551142 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.57 | 48.0 | 3.85e-01 | 100.0% | 75.2% |
| 3383283 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.57 | 47.0 | 4.80e-01 | 100.0% | 98.5% |
| 4270602 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.56 | 45.0 | 2.83e-01 | 91.0% | 32.8% |
| 4028808 | 2.1.1.142 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HROB | 0.56 | 47.0 | 3.69e-01 | 100.0% | 48.8% |
| 4996608 | 2007.9.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 | 0.55 | 39.0 | 2.82e-01 | 100.0% | 25.0% |
| 5010672 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.55 | 48.0 | 4.02e-01 | 100.0% | 83.3% |
| 4965423 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.55 | 46.0 | 3.82e-01 | 95.5% | 99.2% |
| 4057937 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.55 | 47.0 | 3.85e-01 | 100.0% | 78.4% |
| 1736885 | 2.1.1.13 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a | 0.55 | 46.0 | 4.54e-01 | 100.0% | 93.1% |
| 3204729 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.55 | 43.0 | 2.60e-01 | 85.1% | 94.8% |
| 5029346 | 2003.1.2.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase | 0.54 | 45.0 | 2.71e-01 | 92.5% | 42.0% |
| 3940305 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.54 | 37.0 | 2.53e-01 | 70.1% | 26.4% |
| 5059422 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.53 | 44.0 | 2.85e-01 | 92.5% | 88.9% |
| 3567079 | 5.1.2.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40 | 0.51 | 46.0 | 3.19e-01 | 97.0% | 81.5% |
| 3684527 | 221.1.5.3 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Chemotaxis inhibitory protein CHIPS › DUF7734 | 0.51 | 43.0 | 3.90e-01 | 94.0% | 67.7% |
| 4024720 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 41.0 | 3.10e-01 | 95.5% | 74.7% |
| 3614286 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.50 | 35.0 | 2.24e-01 | 97.0% | 14.4% |