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IMGVR_UViG_3300018026_000526-3300018026-Ga0187857_100077607

Arc-Vir

IMGVR_UViG_3300018026_000526-3300018026-Ga0187857_100077607

Quality

95.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-245
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04488.22 best Gly_transf_sug 26.3 1.40e-05 40.4% 38.7%
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mixA00 3.90.550.20 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.75 61.0 5.83e-01 82.9% 88.4%
1ll0B00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.70 66.0 6.45e-01 100.0% 93.6%
6u4bA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.70 66.0 6.18e-01 99.6% 95.6%
1lziA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.66 55.0 5.37e-01 92.7% 80.3%
2c0nA00 3.90.550.40 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.62 46.0 5.14e-01 100.0% 96.8%
2wvlB00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.60 50.0 4.30e-01 87.8% 68.6%
1efpA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 38.0 4.35e-01 99.2% 85.6%
3fetA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.58 35.0 4.12e-01 100.0% 86.1%
3loqA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 31.0 4.09e-01 93.5% 98.4%
6lfnA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 32.0 3.78e-01 99.6% 80.2%
3zf8A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.55 49.0 4.64e-01 92.7% 92.7%
2iw1A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.55 39.0 4.49e-01 99.2% 96.7%
2pl1A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 26.0 3.60e-01 98.8% 90.8%
1q16A07 3.40.228.10 Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 0.53 28.0 3.70e-01 83.7% 93.8%
3gqvA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 34.0 3.89e-01 100.0% 82.6%
3u31A01 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.53 31.0 3.71e-01 99.6% 84.8%
1mxiA00 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.53 32.0 3.86e-01 82.0% 91.0%
3nhmA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 25.0 3.46e-01 99.2% 91.3%
6kv9A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 37.0 4.13e-01 97.6% 90.3%
3h5iA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 26.0 3.53e-01 81.6% 90.4%
2f9fA00 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.52 29.0 3.53e-01 81.6% 80.7%
2b4yA01 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.51 30.0 3.67e-01 98.0% 90.1%
3p9pA03 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.51 29.0 3.54e-01 82.0% 87.0%
2iyeA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.50 28.0 3.42e-01 99.2% 82.2%
3l8uA00 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.50 30.0 3.63e-01 81.6% 90.3%
1xdwA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 32.0 3.56e-01 82.4% 78.2%
1dxyA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 32.0 3.53e-01 82.4% 78.1%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3387081 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.88 86.0 8.52e-01 100.0% 97.6%
3752945 7516.1.1.110 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug, Gb3_synth 0.83 80.0 7.54e-01 100.0% 95.8%
3533597 7516.1.1.110 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug, Gb3_synth 0.82 80.0 7.49e-01 100.0% 93.8%
3412584 7516.1.1.110 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug, Gb3_synth 0.82 80.0 7.02e-01 100.0% 86.5%
3296832 7516.1.1.165 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug, Gb3_synth, Caps_synth 0.82 79.0 7.21e-01 100.0% 89.2%
3463791 7516.1.1.110 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug, Gb3_synth 0.81 79.0 7.24e-01 100.0% 90.7%
3366906 7516.1.1.110 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug, Gb3_synth 0.81 78.0 6.84e-01 100.0% 81.5%
4013726 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.80 77.0 7.31e-01 100.0% 97.8%
None 0.79 76.0 6.43e-01 100.0% 82.4%
4078285 7516.1.1.75 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Caps_synth 0.79 76.0 6.42e-01 100.0% 88.0%
3787900 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.78 63.0 5.66e-01 82.9% 83.4%
4547228 7516.1.1.75 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Caps_synth 0.78 74.0 6.49e-01 100.0% 87.4%
3179443 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.78 66.0 6.35e-01 86.9% 98.5%
3697890 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.77 66.0 5.77e-01 87.8% 79.6%
3196742 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.77 62.0 5.85e-01 88.2% 70.0%
4015841 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.77 66.0 6.23e-01 88.2% 94.4%
4021311 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.77 66.0 6.01e-01 87.8% 89.5%
3686694 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.77 69.0 6.29e-01 93.9% 93.7%
4021161 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.76 69.0 6.26e-01 93.5% 85.3%
3191860 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.76 65.0 6.18e-01 88.2% 93.3%
4016921 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.76 65.0 6.20e-01 87.8% 96.8%
3176090 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.76 65.0 5.69e-01 87.3% 92.9%
4170791 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.76 64.0 5.93e-01 86.9% 89.0%
3187254 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.76 63.0 5.83e-01 88.2% 70.5%
3631461 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.76 64.0 6.18e-01 86.9% 96.7%
3587491 7516.1.1.75 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Caps_synth 0.76 70.0 6.66e-01 98.4% 84.3%
3632130 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.75 64.0 6.04e-01 87.8% 89.8%
3191178 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.74 66.0 5.81e-01 91.0% 97.9%
3386735 7516.1.1.75 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Caps_synth 0.74 71.0 6.62e-01 99.2% 88.3%
4521363 7516.1.1.17 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_6 0.74 61.0 5.87e-01 86.1% 83.8%
3897091 7516.1.1.17 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_6 0.73 61.0 5.76e-01 86.5% 82.4%
3183916 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.72 62.0 6.41e-01 88.2% 94.8%
3838138 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.72 69.0 6.33e-01 100.0% 94.1%
3573782 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.71 59.0 6.00e-01 99.6% 89.4%
4338888 7516.1.1.111 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Stealth_CR2, Stealth_CR1, Stealth_CR3, Stealth_CR4 0.70 65.0 5.94e-01 100.0% 94.7%
3408841 7516.1.1.111 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Stealth_CR2, Stealth_CR1, Stealth_CR3, Stealth_CR4 0.70 65.0 5.83e-01 100.0% 86.3%
3838037 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.69 66.0 6.31e-01 100.0% 95.6%
3783542 7516.1.1.61 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Mannosyl_trans3 0.69 65.0 5.17e-01 100.0% 80.0%
4323336 7516.1.1.61 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Mannosyl_trans3 0.68 64.0 5.10e-01 100.0% 81.1%
3563990 7516.1.1.37 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CHGN 0.67 58.0 5.61e-01 99.6% 81.8%
4945320 7516.1.1.10 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CofC 0.65 50.0 5.54e-01 100.0% 99.0%
3953008 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.64 52.0 5.22e-01 87.8% 84.5%
3553254 7516.1.1.100 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › GT_PLOD 0.62 58.0 5.83e-01 100.0% 99.6%
5025625 2003.1.10.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › GARS_N 0.61 29.0 4.17e-01 89.0% 98.2%
3605664 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.61 57.0 5.11e-01 100.0% 95.8%
3714115 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.60 57.0 4.85e-01 100.0% 84.7%
5025253 7516.1.1.26 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_tranf_2_3 0.60 55.0 4.80e-01 96.3% 84.2%
5009765 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.59 50.0 4.65e-01 88.2% 74.1%
3318340 7516.1.1.39 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › STELLO 0.59 50.0 4.17e-01 87.8% 69.9%
5012039 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.58 53.0 4.57e-01 95.9% 81.4%
3838965 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.57 30.0 3.68e-01 81.6% 78.7%
4315670 2006.1.4.17 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF188 0.57 31.0 4.06e-01 99.6% 97.6%
5041207 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.55 32.0 3.74e-01 88.6% 80.6%
4339836 2006.1.4.17 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF188 0.54 31.0 3.95e-01 82.4% 93.8%
5067061 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.54 35.0 4.28e-01 96.3% 100.0%
3586450 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.53 34.0 3.62e-01 81.2% 70.5%
4931165 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.52 39.0 4.26e-01 99.6% 92.7%
3415022 7512.1.1.83 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT, EryCIII-like_C 0.52 47.0 3.89e-01 100.0% 95.1%
3166231 2003.1.1.51 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.51 37.0 4.11e-01 100.0% 94.2%
3404159 7512.1.1.1 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT 0.50 46.0 3.64e-01 100.0% 85.9%
3176314 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.50 41.0 3.80e-01 98.4% 68.2%
4958173 7512.1.1.51 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_2 0.50 32.0 3.93e-01 96.3% 100.0%