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IMGVR_UViG_3300018069_000019-3300018069-Ga0192660_111125
Arc-VirIMGVR_UViG_3300018069_000019-3300018069-Ga0192660_111125
Identity
- Kingdom:
- archaea
Quality
63.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 229-293
Domain cluster:
rep: IMGVR_UViG_2870879507_000002-2870879507-2870883290__D67-124
D2
medium
residues 44-108
D3
medium
residues 172-206
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.91 | 80.0 | 5.77e-01 | 100.0% | 39.4% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 73.0 | 5.98e-01 | 100.0% | 53.7% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 66.0 | 5.69e-01 | 94.3% | 58.6% |
| 1u78A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 68.0 | 6.43e-01 | 100.0% | 86.7% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 70.0 | 5.91e-01 | 100.0% | 58.3% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 65.0 | 5.35e-01 | 100.0% | 50.0% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 64.0 | 4.96e-01 | 97.1% | 41.2% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.79 | 64.0 | 5.67e-01 | 100.0% | 64.3% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 62.0 | 4.83e-01 | 100.0% | 42.0% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 62.0 | 4.75e-01 | 100.0% | 40.0% |
| 6g1dA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 59.0 | 4.71e-01 | 97.1% | 42.7% |
| 5xe7A01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.75 | 59.0 | 4.08e-01 | 100.0% | 26.1% |
| 3szpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 60.0 | 4.66e-01 | 100.0% | 40.4% |
| 2cw1A00 | 3.30.240.10 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › CRO Repressor | 0.74 | 56.0 | 4.81e-01 | 97.1% | 49.2% |
| 3fymA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 56.0 | 4.36e-01 | 91.4% | 41.5% |
| 3g7dA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 57.0 | 4.40e-01 | 97.1% | 41.9% |
| 7vjmB01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.69 | 58.0 | 4.87e-01 | 100.0% | 64.1% |
| 3ivpD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 55.0 | 4.44e-01 | 100.0% | 50.7% |
| 2fjrA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 51.0 | 4.09e-01 | 88.6% | 47.4% |
| 1fi2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 53.0 | 3.36e-01 | 100.0% | 54.7% |
| 5wxuD01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 54.0 | 3.30e-01 | 100.0% | 56.8% |
| 1k6yA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.64 | 49.0 | 4.70e-01 | 97.1% | 73.9% |
| 1fxzA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 49.0 | 3.25e-01 | 97.1% | 64.0% |
| 5cz2G00 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.62 | 45.0 | 4.49e-01 | 100.0% | 85.4% |
| 1cukA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.58 | 45.0 | 3.74e-01 | 100.0% | 68.4% |
| 2yn7A00 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.55 | 40.0 | 2.54e-01 | 82.9% | 62.6% |
| 3tmpA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.53 | 41.0 | 2.88e-01 | 100.0% | 70.7% |
| 3qvmB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 39.0 | 2.44e-01 | 97.1% | 21.4% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4385054 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 81.0 | 7.75e-01 | 100.0% | 90.0% |
| 3407600 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 78.0 | 6.52e-01 | 100.0% | 58.3% |
| 3066183 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.90 | 78.0 | 5.48e-01 | 100.0% | 34.3% |
| 5002944 | 101.1.3.11 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_ISL3 | 0.90 | 77.0 | 5.23e-01 | 100.0% | 28.0% |
| 3190018 | 101.1.1.201 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Bot1p | 0.89 | 77.0 | 5.89e-01 | 100.0% | 46.3% |
| 3402581 | 101.1.1.96 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Neugrin | 0.89 | 76.0 | 6.10e-01 | 100.0% | 55.7% |
| 5028266 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 75.0 | 6.34e-01 | 100.0% | 61.0% |
| 4258153 | 101.1.1.43 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Mor | 0.87 | 76.0 | 6.55e-01 | 100.0% | 63.6% |
| 3962431 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.86 | 74.0 | 5.81e-01 | 100.0% | 48.0% |
| 4393383 | 101.1.1.62 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 | 0.86 | 73.0 | 7.10e-01 | 100.0% | 92.5% |
| 3165428 | 101.1.1.43 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Mor | 0.86 | 74.0 | 6.08e-01 | 100.0% | 53.8% |
| 2475319 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.86 | 73.0 | 5.98e-01 | 100.0% | 53.7% |
| 3509240 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.86 | 72.0 | 5.96e-01 | 100.0% | 53.8% |
| 5054981 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.85 | 71.0 | 5.77e-01 | 100.0% | 51.4% |
| 4965968 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.84 | 70.0 | 6.15e-01 | 100.0% | 65.5% |
| 4370821 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.84 | 70.0 | 5.34e-01 | 100.0% | 42.4% |
| 4955045 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.84 | 69.0 | 6.31e-01 | 100.0% | 72.0% |
| 4964802 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 69.0 | 5.95e-01 | 100.0% | 60.0% |
| 3387117 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.83 | 69.0 | 5.39e-01 | 100.0% | 45.0% |
| 3224978 | 101.1.1.52 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD | 0.83 | 69.0 | 5.64e-01 | 100.0% | 51.5% |
| 4009354 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.82 | 68.0 | 5.16e-01 | 100.0% | 41.1% |
| 3589664 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.82 | 67.0 | 5.18e-01 | 100.0% | 42.4% |
| 5021231 | 101.1.1.544 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF1670 | 0.81 | 67.0 | 5.17e-01 | 100.0% | 42.4% |
| 5049442 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.81 | 68.0 | 5.15e-01 | 100.0% | 40.0% |
| 3972217 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.81 | 66.0 | 5.05e-01 | 100.0% | 40.0% |
| 3966995 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.80 | 67.0 | 5.05e-01 | 100.0% | 40.0% |
| 4605333 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.80 | 66.0 | 5.10e-01 | 100.0% | 42.4% |
| 5056141 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.80 | 67.0 | 5.87e-01 | 100.0% | 69.1% |
| 5038587 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.80 | 65.0 | 5.64e-01 | 100.0% | 61.7% |
| 4958809 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.80 | 66.0 | 5.08e-01 | 100.0% | 44.7% |
| 3970951 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 67.0 | 6.08e-01 | 100.0% | 72.0% |
| 3590569 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.79 | 64.0 | 5.08e-01 | 100.0% | 45.0% |
| 3289143 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.79 | 65.0 | 5.05e-01 | 100.0% | 42.4% |
| 3946899 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.79 | 63.0 | 4.80e-01 | 100.0% | 37.9% |
| 3968471 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.79 | 65.0 | 4.93e-01 | 100.0% | 40.0% |
| 3948722 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.79 | 65.0 | 4.84e-01 | 100.0% | 37.9% |
| 4031672 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.78 | 63.0 | 5.04e-01 | 100.0% | 45.0% |
| 5047233 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.78 | 65.0 | 5.73e-01 | 100.0% | 69.1% |
| 3981659 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.78 | 63.0 | 4.85e-01 | 100.0% | 41.1% |
| 5060805 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 66.0 | 4.81e-01 | 100.0% | 35.0% |
| 4032183 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.77 | 63.0 | 4.99e-01 | 100.0% | 45.0% |
| 4979168 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 65.0 | 5.71e-01 | 100.0% | 63.6% |
| 3946548 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.77 | 60.0 | 4.72e-01 | 100.0% | 40.0% |
| 5076741 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.77 | 61.0 | 5.67e-01 | 100.0% | 76.0% |
| 3953104 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 61.0 | 4.15e-01 | 100.0% | 24.1% |
| 5072419 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.76 | 65.0 | 5.83e-01 | 100.0% | 76.0% |
| 3945690 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.76 | 60.0 | 4.69e-01 | 100.0% | 40.0% |
| 4032354 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.76 | 59.0 | 4.64e-01 | 100.0% | 40.0% |
| 4977346 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 61.0 | 5.64e-01 | 100.0% | 76.0% |
| 4944620 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 62.0 | 5.50e-01 | 100.0% | 69.1% |
| 5009656 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 62.0 | 5.19e-01 | 100.0% | 58.5% |
| 3895373 | 101.1.1.226 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0240 | 0.74 | 57.0 | 5.38e-01 | 100.0% | 80.0% |
| 3971636 | 101.28.1.0 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins | 0.73 | 59.0 | 5.77e-01 | 100.0% | 92.5% |
| 4312098 | 101.1.3.8 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 | 0.72 | 59.0 | 5.57e-01 | 100.0% | 77.8% |
| 4952293 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.72 | 60.0 | 5.89e-01 | 100.0% | 90.0% |
| 5045296 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 61.0 | 5.33e-01 | 100.0% | 63.6% |
| 3444212 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 60.0 | 4.89e-01 | 100.0% | 58.6% |
| 5047333 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 58.0 | 4.46e-01 | 100.0% | 43.3% |
| 5078923 | 101.1.2.66 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mga | 0.70 | 59.0 | 4.33e-01 | 100.0% | 39.0% |
| 3282811 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.69 | 53.0 | 5.25e-01 | 97.1% | 85.0% |
| 4945903 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 53.0 | 4.83e-01 | 100.0% | 65.5% |
| 3604422 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.66 | 52.0 | 4.38e-01 | 100.0% | 51.4% |
| 4999897 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.62 | 49.0 | 4.03e-01 | 100.0% | 56.0% |