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IMGVR_UViG_3300018080_003942-3300018080-Ga0180433_10000269105

Arc-Vir

IMGVR_UViG_3300018080_003942-3300018080-Ga0180433_10000269105

Identity

Kingdom:
archaea

Quality

83.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-94
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 35.0 3.72e-01 72.2% 59.7%
4bdxA00 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.58 31.0 3.09e-01 100.0% 47.0%
5x6vG00 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.57 41.0 3.53e-01 77.2% 59.8%
2cqoA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 40.0 3.82e-01 77.2% 87.0%
1rpyB00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 42.0 4.10e-01 97.5% 79.1%
1milA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 45.0 4.16e-01 100.0% 75.0%
1xa6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.52 44.0 4.15e-01 100.0% 87.5%
2ymsA00 2.40.128.630 Mainly Beta › Beta Barrel › Lipocalin › 0.52 40.0 3.47e-01 82.3% 92.7%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 45.0 3.86e-01 100.0% 72.4%
7dpyB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.52 43.0 4.25e-01 96.2% 89.2%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 36.0 3.93e-01 74.7% 90.8%
1efzA00 3.20.20.105 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like 0.51 42.0 2.85e-01 98.7% 47.8%
2cayB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 33.0 2.84e-01 77.2% 40.5%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5070745 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 33.0 4.11e-01 72.2% 80.0%
3221377 9.11.1.0 ↗ beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like 0.62 45.0 4.03e-01 77.2% 84.3%
3548037 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.59 35.0 3.00e-01 75.9% 34.6%
3510537 7502.1.1.2 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix 0.57 51.0 3.98e-01 100.0% 78.7%
3414238 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.57 36.0 4.05e-01 77.2% 86.2%
3270836 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.57 36.0 3.19e-01 77.2% 43.5%
3520452 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.56 33.0 3.75e-01 82.3% 81.8%
4069753 295.1.1.2 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › SsgA 0.56 46.0 3.92e-01 91.1% 74.8%
3514123 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.56 46.0 4.02e-01 93.7% 92.0%
4025365 220.1.1.74 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.55 35.0 3.19e-01 77.2% 46.4%
1164102 3535.1.1.1 ↗ a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › CamS 0.55 37.0 3.31e-01 72.2% 87.9%
3518950 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.54 46.0 4.38e-01 93.7% 84.2%
3586825 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 42.0 2.86e-01 87.3% 53.1%
4961462 5.1.4.40 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.54 38.0 2.72e-01 77.2% 43.9%
3481722 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.54 46.0 4.24e-01 100.0% 80.0%
3562938 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 32.0 2.83e-01 75.9% 37.6%
3859895 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.53 32.0 2.12e-01 75.9% 12.5%
3508120 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.53 45.0 4.07e-01 100.0% 71.3%
2568928 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.52 32.0 3.63e-01 81.0% 86.0%
3948516 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.52 37.0 4.01e-01 74.7% 90.8%
3502261 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.52 45.0 3.87e-01 100.0% 62.2%
3513932 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.52 45.0 4.05e-01 100.0% 73.0%
3518153 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.52 44.0 4.06e-01 100.0% 74.5%
3104388 5.1.5.92 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_EML 0.51 43.0 2.90e-01 96.2% 46.3%
5023404 208.1.1.1 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep 0.51 41.0 3.04e-01 89.9% 57.8%
3502259 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.51 44.0 3.87e-01 100.0% 65.6%
3509350 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.50 43.0 3.71e-01 98.7% 73.9%