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IMGVR_UViG_3300018080_003942-3300018080-Ga0180433_10000269110

Arc-Vir

IMGVR_UViG_3300018080_003942-3300018080-Ga0180433_10000269110

Identity

Kingdom:
archaea

Quality

76.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-69
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e55A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 45.0 3.21e-01 79.4% 43.8%
7vufD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 46.0 3.29e-01 82.5% 47.4%
1a97B00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 44.0 3.46e-01 79.4% 48.0%
3iiiA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 45.0 3.00e-01 85.7% 45.5%
2fgyA03 3.30.1330.140 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Carboxysome Shell Carbonic Anhydrase, C-terminal domain 0.56 42.0 3.59e-01 87.3% 75.2%
6b10A00 3.75.10.10 Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A 0.56 42.0 2.76e-01 85.7% 31.2%
7clgA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.55 40.0 3.03e-01 84.1% 63.2%
3wajA02 3.40.50.12610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 39.0 2.96e-01 77.8% 63.7%
2vycA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.53 40.0 2.69e-01 85.7% 25.2%
1fs0G01 3.40.1380.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit 0.52 39.0 3.27e-01 87.3% 53.8%
5is2A03 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 39.0 2.87e-01 88.9% 33.6%
1a3wA01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.51 35.0 2.78e-01 74.6% 94.2%
4gxtA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.51 38.0 2.72e-01 84.1% 40.4%
3kd3A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.51 37.0 2.91e-01 81.0% 44.8%
2z3gB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.51 39.0 3.26e-01 88.9% 55.1%
4ezeB00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.51 38.0 2.60e-01 87.3% 29.1%
4twbA01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 40.0 3.19e-01 95.2% 70.4%
5u95B01 3.40.50.980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 36.0 2.78e-01 81.0% 49.4%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4964485 7592.1.1.3 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N 0.64 49.0 3.71e-01 87.3% 56.5%
3708653 7573.1.1.3 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyl_synth 0.59 41.0 3.04e-01 73.0% 36.5%
4557450 7573.1.1.1 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.59 41.0 3.26e-01 76.2% 36.9%
4554875 2004.1.1.45 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MutS_V 0.58 41.0 2.98e-01 82.5% 27.0%
3700430 2004.5.1.3 ↗ a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN 0.55 38.0 2.66e-01 79.4% 19.6%
4955005 7583.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like domain in AF1104-like proteins › Rossmann-like domain in AF1104-like proteins › Rossmann-like domain in AF1104-like proteins › ARMT1-like_dom 0.54 44.0 3.21e-01 100.0% 100.0%
5073765 7573.1.1.2 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran_N 0.54 41.0 3.18e-01 88.9% 70.9%
3980839 2008.1.1.77 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NOV_C 0.53 39.0 3.06e-01 82.5% 49.0%
3386965 2006.1.1.14 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.53 40.0 3.03e-01 88.9% 57.4%
3284239 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.53 42.0 3.08e-01 88.9% 49.4%
3949117 2006.1.1.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.53 39.0 2.74e-01 84.1% 28.8%
4076352 2006.1.1.14 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.53 40.0 2.93e-01 88.9% 34.0%
3285025 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.53 40.0 2.83e-01 85.7% 47.3%
4230265 2006.1.1.14 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.52 42.0 3.01e-01 96.8% 52.8%
4547240 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.52 38.0 2.68e-01 82.5% 25.1%
5022940 7604.1.1.0 ↗ a/b three-layered sandwiches › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit 0.52 40.0 3.50e-01 90.5% 62.7%
3504144 2007.1.16.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 0.52 36.0 3.36e-01 81.0% 54.4%
3961432 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 40.0 3.12e-01 88.9% 58.1%
4212820 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.51 39.0 2.61e-01 87.3% 23.3%
3279115 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 40.0 2.72e-01 88.9% 33.6%
4041349 7573.1.1.2 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran_N 0.51 37.0 2.96e-01 84.1% 69.7%
5033764 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 40.0 2.75e-01 90.5% 37.2%
4969735 7584.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins 0.50 40.0 2.97e-01 90.5% 52.2%
5080373 2006.1.1.14 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.50 38.0 2.81e-01 88.9% 39.5%
4978794 2006.1.1.14 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.50 38.0 2.75e-01 87.3% 37.2%
4943545 4143.1.1.11 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › UPF0020 0.50 37.0 3.21e-01 84.1% 74.5%
4465449 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.50 36.0 2.73e-01 79.4% 41.6%