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IMGVR_UViG_3300018080_003942-3300018080-Ga0180433_1000026916
Arc-VirIMGVR_UViG_3300018080_003942-3300018080-Ga0180433_1000026916
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-96
D2
high
residues 99-163
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3w5mA06 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.70 | 42.0 | 3.59e-01 | 96.9% | 39.0% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.68 | 46.0 | 4.14e-01 | 93.8% | 51.1% |
| 3a35A01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 49.0 | 4.38e-01 | 96.9% | 55.4% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.64 | 46.0 | 4.90e-01 | 93.8% | 89.5% |
| 2w5eA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.64 | 45.0 | 4.30e-01 | 98.5% | 64.9% |
| 1c5eA00 | 2.40.300.10 | Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D | 0.60 | 51.0 | 4.61e-01 | 100.0% | 90.5% |
| 2j5uA02 | 2.40.10.340 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 | 0.59 | 46.0 | 4.24e-01 | 95.4% | 65.5% |
| 1yu0A02 | 2.80.20.10 | Mainly Beta › Trefoil › Tail fiber receptor-binding protein › Tail fiber receptor-binding protein | 0.58 | 47.0 | 3.73e-01 | 93.8% | 75.3% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 35.0 | 3.74e-01 | 75.4% | 71.4% |
| 1nxzA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.57 | 45.0 | 4.44e-01 | 96.9% | 79.2% |
| 1wxrA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 50.0 | 3.32e-01 | 98.5% | 48.6% |
| 2fjrA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.54 | 40.0 | 3.43e-01 | 81.5% | 66.4% |
| 2bhgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 42.0 | 3.66e-01 | 100.0% | 54.9% |
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.53 | 46.0 | 4.48e-01 | 98.5% | 85.9% |
| 5jm6A02 | 2.30.250.10 | Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 | 0.52 | 43.0 | 3.43e-01 | 95.4% | 72.7% |
| 8bveA03 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.52 | 40.0 | 3.89e-01 | 84.6% | 100.0% |
| 4dyoA02 | 2.30.250.10 | Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 | 0.51 | 42.0 | 3.41e-01 | 96.9% | 74.1% |
| 4fvdA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 46.0 | 4.05e-01 | 100.0% | 70.2% |
| 2hrvA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 44.0 | 3.87e-01 | 98.5% | 65.3% |
| 3vgpA00 | 3.40.50.12610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 40.0 | 3.12e-01 | 92.3% | 49.7% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3743935 | 1.1.8.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_CAF17_C | 0.62 | 51.0 | 4.78e-01 | 96.9% | 73.8% |
| 3648449 | 1.1.9.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_4 | 0.60 | 49.0 | 4.37e-01 | 95.4% | 64.4% |
| 3830187 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 34.0 | 3.70e-01 | 72.3% | 70.9% |
| 5039270 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.57 | 44.0 | 4.67e-01 | 90.8% | 100.0% |
| 3222051 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 36.0 | 3.61e-01 | 76.9% | 69.2% |
| 3740846 | 1.1.7.46 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B | 0.53 | 44.0 | 3.76e-01 | 96.9% | 62.6% |
| 3547084 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 36.0 | 3.30e-01 | 72.3% | 81.1% |
| 4448587 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.52 | 43.0 | 3.54e-01 | 95.4% | 56.0% |
| 3688604 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.51 | 42.0 | 3.59e-01 | 93.8% | 57.1% |
| 3037102 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 30.0 | 3.12e-01 | 81.5% | 61.3% |