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IMGVR_UViG_3300018080_003942-3300018080-Ga0180433_100002692
Arc-VirIMGVR_UViG_3300018080_003942-3300018080-Ga0180433_100002692
Identity
- Kingdom:
- archaea
Quality
69.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 31-119
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ikmA02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.61 | 42.0 | 4.18e-01 | 70.8% | 81.7% |
| 1cy5A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.61 | 43.0 | 4.31e-01 | 74.2% | 87.0% |
| 1gpjA03 | 1.10.1200.70 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glutamyl tRNA-reductase dimerization domain | 0.57 | 44.0 | 4.54e-01 | 83.1% | 98.8% |
| 4cs9B02 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.55 | 39.0 | 3.71e-01 | 74.2% | 100.0% |
| 1gaxA02 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.55 | 38.0 | 2.89e-01 | 73.0% | 75.3% |
| 3sqnA02 | 1.10.1790.40 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › | 0.52 | 36.0 | 3.33e-01 | 73.0% | 83.1% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 37.0 | 3.43e-01 | 76.4% | 81.4% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3767264 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.59 | 32.0 | 2.98e-01 | 100.0% | 38.3% |
| 4029774 | 1056.1.1.0 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain | 0.56 | 39.0 | 2.69e-01 | 73.0% | 26.9% |
| 4579424 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.55 | 42.0 | 3.05e-01 | 79.8% | 40.0% |
| 3264507 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.54 | 37.0 | 4.01e-01 | 71.9% | 92.0% |
| 4927892 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.52 | 41.0 | 2.64e-01 | 82.0% | 30.7% |