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IMGVR_UViG_3300018080_003942-3300018080-Ga0180433_1000026936
Arc-VirIMGVR_UViG_3300018080_003942-3300018080-Ga0180433_1000026936
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-100
Domain cluster:
rep: SR-VP_2-4_scaffold_141_2548329_prodigal-single.1__X__X__00211__D1-121
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02075.24 best | RuvC | 37.6 | 2.80e-09 | 97.0% | 60.8% |
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hjrA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.93 | 84.0 | 7.02e-01 | 99.0% | 59.5% |
| 4ep4A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.90 | 83.0 | 6.85e-01 | 99.0% | 59.0% |
| 4ktwA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.77 | 71.0 | 5.95e-01 | 100.0% | 61.9% |
| 1kcfB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.76 | 70.0 | 5.31e-01 | 100.0% | 45.6% |
| 3bexA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.75 | 56.0 | 5.05e-01 | 100.0% | 58.1% |
| 4gniA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.71 | 53.0 | 5.68e-01 | 100.0% | 89.7% |
| 3r9pB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.70 | 63.0 | 5.21e-01 | 100.0% | 68.9% |
| 4c23B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.70 | 63.0 | 4.80e-01 | 100.0% | 94.4% |
| 3mdqA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.70 | 63.0 | 5.11e-01 | 100.0% | 83.1% |
| 3ll3B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.69 | 63.0 | 4.70e-01 | 100.0% | 89.4% |
| 3mdqA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.69 | 63.0 | 5.83e-01 | 98.0% | 82.1% |
| 1sazA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.69 | 62.0 | 5.14e-01 | 99.0% | 67.0% |
| 2w40A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.68 | 62.0 | 4.59e-01 | 100.0% | 91.3% |
| 4bg8A01 | 3.30.420.430 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.68 | 57.0 | 5.28e-01 | 100.0% | 71.3% |
| 3cerC01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.67 | 61.0 | 5.58e-01 | 99.0% | 80.5% |
| 1ig8A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 59.0 | 5.40e-01 | 100.0% | 91.8% |
| 6r2nA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 59.0 | 5.29e-01 | 100.0% | 92.1% |
| 1nbwA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 52.0 | 4.76e-01 | 99.0% | 64.4% |
| 4a2bA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 55.0 | 4.94e-01 | 100.0% | 65.9% |
| 3aapA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 59.0 | 5.46e-01 | 100.0% | 82.4% |
| 2aa4A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 57.0 | 5.17e-01 | 99.0% | 72.3% |
| 6ksrA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.64 | 56.0 | 4.90e-01 | 100.0% | 85.6% |
| 2qm1B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 55.0 | 4.84e-01 | 99.0% | 70.4% |
| 2q2rA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.62 | 55.0 | 4.63e-01 | 100.0% | 59.3% |
| 2vqmA00 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.61 | 55.0 | 3.68e-01 | 100.0% | 34.3% |
| 3lyuA01 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.60 | 55.0 | 5.28e-01 | 99.0% | 100.0% |
| 6z6fA01 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.60 | 54.0 | 3.69e-01 | 100.0% | 35.9% |
| 2f96A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 53.0 | 4.23e-01 | 100.0% | 66.7% |
| 3m1rB01 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.59 | 53.0 | 3.78e-01 | 99.0% | 36.1% |
| 1zu4A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 50.0 | 3.94e-01 | 95.0% | 70.6% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 35.0 | 3.68e-01 | 91.0% | 67.7% |
| 1t5fA00 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.56 | 49.0 | 3.52e-01 | 100.0% | 60.8% |
| 1qsmD00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 39.0 | 3.48e-01 | 84.0% | 48.7% |
| 2euiA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 45.0 | 4.05e-01 | 89.0% | 80.0% |
| 4wiqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 32.0 | 3.16e-01 | 81.0% | 52.8% |
| 4e19A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 47.0 | 4.31e-01 | 99.0% | 78.9% |
| 3u3gA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 49.0 | 4.38e-01 | 100.0% | 75.7% |
| 1vypX00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 48.0 | 3.25e-01 | 99.0% | 57.7% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 46.0 | 3.50e-01 | 99.0% | 46.9% |
| 5h80B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.50 | 43.0 | 3.27e-01 | 95.0% | 87.3% |
| 6mzoA01 | 3.40.50.11970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 40.0 | 3.69e-01 | 85.0% | 89.7% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4529580 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.96 | 89.0 | 7.36e-01 | 100.0% | 60.0% |
| 4373226 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.95 | 87.0 | 6.82e-01 | 100.0% | 51.4% |
| 4638438 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.95 | 89.0 | 7.32e-01 | 100.0% | 60.6% |
| 4069907 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.95 | 89.0 | 7.16e-01 | 100.0% | 57.1% |
| 4218879 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.94 | 86.0 | 7.16e-01 | 99.0% | 60.6% |
| 4414942 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.94 | 88.0 | 7.30e-01 | 100.0% | 60.6% |
| 4631411 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.94 | 87.0 | 7.19e-01 | 99.0% | 60.1% |
| 4938348 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.94 | 84.0 | 6.84e-01 | 100.0% | 55.8% |
| 4292358 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.94 | 86.0 | 7.04e-01 | 100.0% | 57.6% |
| 4610182 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.94 | 87.0 | 6.74e-01 | 99.0% | 50.5% |
| 4484979 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.94 | 87.0 | 7.04e-01 | 100.0% | 57.1% |
| 3966304 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.94 | 86.0 | 7.18e-01 | 100.0% | 61.3% |
| 4522962 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.94 | 86.0 | 6.93e-01 | 100.0% | 54.9% |
| 4162427 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.94 | 86.0 | 7.09e-01 | 99.0% | 59.4% |
| 4106513 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.94 | 87.0 | 7.07e-01 | 100.0% | 57.1% |
| 4571749 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.94 | 87.0 | 7.13e-01 | 100.0% | 58.8% |
| 4252006 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.94 | 85.0 | 6.99e-01 | 99.0% | 57.6% |
| 4123278 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.93 | 86.0 | 6.96e-01 | 100.0% | 56.5% |
| 4162179 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.93 | 84.0 | 7.04e-01 | 99.0% | 60.6% |
| 4202129 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.92 | 85.0 | 7.05e-01 | 100.0% | 60.0% |
| 4296237 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.92 | 84.0 | 7.03e-01 | 99.0% | 61.3% |
| 4543638 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.92 | 84.0 | 6.87e-01 | 99.0% | 57.6% |
| 1096260 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.91 | 82.0 | 6.85e-01 | 100.0% | 59.9% |
| 4579381 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.91 | 84.0 | 6.95e-01 | 99.0% | 60.0% |
| 4240117 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.90 | 84.0 | 6.75e-01 | 100.0% | 56.6% |
| 5040920 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.86 | 81.0 | 6.44e-01 | 99.0% | 56.7% |
| 5073213 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.77 | 70.0 | 5.41e-01 | 100.0% | 64.1% |
| 3978199 | 2484.1.1.248 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GpA_nuclease | 0.77 | 64.0 | 4.72e-01 | 100.0% | 36.7% |
| 5024208 | 2484.1.1.23 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydantoinase_A | 0.74 | 65.0 | 5.81e-01 | 99.0% | 69.6% |
| 4012666 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.73 | 67.0 | 5.23e-01 | 100.0% | 70.7% |
| 5020335 | 2484.1.1.29 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA | 0.72 | 66.0 | 6.10e-01 | 98.0% | 83.2% |
| 3291482 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.72 | 58.0 | 5.73e-01 | 99.0% | 81.9% |
| 5063324 | 2484.1.1.29 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA | 0.72 | 66.0 | 6.06e-01 | 98.0% | 81.6% |
| 5009779 | 2484.1.1.29 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA | 0.71 | 64.0 | 5.90e-01 | 98.0% | 81.6% |
| 3622016 | 2484.5.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › Peptidase_A17 | 0.70 | 49.0 | 4.82e-01 | 71.0% | 74.3% |
| 3940510 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.70 | 48.0 | 5.29e-01 | 70.0% | 96.2% |
| 3387017 | 2484.1.1.29 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA | 0.70 | 64.0 | 5.73e-01 | 99.0% | 77.8% |
| 4928236 | 2484.1.1.29 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA | 0.70 | 63.0 | 4.30e-01 | 99.0% | 30.1% |
| 4975528 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.69 | 62.0 | 5.50e-01 | 100.0% | 69.0% |
| 5036491 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.68 | 61.0 | 4.56e-01 | 100.0% | 88.0% |
| 3338071 | 2484.1.1.215 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 | 0.68 | 56.0 | 4.78e-01 | 100.0% | 55.2% |
| 3456693 | 2484.1.1.215 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 | 0.68 | 56.0 | 5.65e-01 | 100.0% | 90.9% |
| 3963401 | 2484.1.1.61 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PilM_2 | 0.67 | 60.0 | 4.93e-01 | 98.0% | 85.6% |
| 3597605 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.65 | 54.0 | 4.52e-01 | 100.0% | 52.4% |
| 3709761 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.65 | 55.0 | 5.23e-01 | 100.0% | 77.5% |
| 3712058 | 2484.1.1.72 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › YqgF | 0.65 | 53.0 | 4.56e-01 | 99.0% | 55.0% |
| 3518382 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.65 | 50.0 | 5.33e-01 | 94.0% | 94.1% |
| 3923261 | 2484.1.1.230 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 | 0.65 | 56.0 | 5.25e-01 | 100.0% | 78.3% |
| 2325425 | 2484.1.1.31 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Glucokinase | 0.65 | 59.0 | 5.10e-01 | 100.0% | 66.0% |
| 3457175 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.65 | 55.0 | 4.09e-01 | 100.0% | 36.2% |
| 11195 | 2484.1.1.56 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDR | 0.65 | 50.0 | 5.17e-01 | 83.0% | 88.0% |
| 3947630 | 2484.1.1.56 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDR | 0.64 | 58.0 | 3.78e-01 | 100.0% | 48.5% |
| 3674460 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.64 | 44.0 | 3.37e-01 | 71.0% | 33.8% |
| None | — | 0.64 | 55.0 | 4.89e-01 | 100.0% | 66.2% | |
| 3701860 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 51.0 | 5.25e-01 | 99.0% | 92.6% |
| 3979131 | 2484.1.1.8 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK | 0.63 | 57.0 | 4.82e-01 | 100.0% | 63.6% |
| 4484910 | 2484.1.1.31 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Glucokinase | 0.63 | 53.0 | 5.12e-01 | 99.0% | 80.9% |
| 4608282 | 2484.1.1.70 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FtsA | 0.61 | 55.0 | 3.70e-01 | 100.0% | 46.2% |
| 4955051 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 47.0 | 4.74e-01 | 100.0% | 83.0% |
| 3935094 | 2484.5.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 | 0.60 | 49.0 | 4.71e-01 | 100.0% | 75.7% |
| 3664107 | 192.18.1.0 ↗ | alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like | 0.60 | 51.0 | 3.05e-01 | 100.0% | 11.6% |
| 3375711 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.60 | 48.0 | 5.05e-01 | 99.0% | 94.4% |
| 5044008 | 2484.1.1.136 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutL | 0.60 | 53.0 | 4.67e-01 | 98.0% | 72.7% |
| 3833283 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.60 | 47.0 | 3.47e-01 | 87.0% | 32.5% |
| 5063764 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.59 | 50.0 | 4.09e-01 | 100.0% | 49.7% |
| 4420316 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.59 | 48.0 | 3.91e-01 | 100.0% | 45.0% |
| 3926560 | 2484.1.1.212 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH | 0.59 | 53.0 | 4.82e-01 | 100.0% | 74.8% |
| 5045679 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 52.0 | 4.86e-01 | 98.0% | 94.4% |
| 3933422 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.59 | 53.0 | 4.87e-01 | 100.0% | 76.2% |
| 2675138 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.59 | 41.0 | 3.67e-01 | 84.0% | 50.3% |
| 3923656 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.58 | 53.0 | 4.72e-01 | 100.0% | 72.1% |
| 3940091 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.58 | 53.0 | 4.73e-01 | 100.0% | 72.1% |
| 3933536 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.58 | 53.0 | 4.81e-01 | 100.0% | 74.1% |
| 4628548 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.58 | 45.0 | 4.26e-01 | 98.0% | 68.0% |
| 3924494 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.58 | 53.0 | 5.03e-01 | 100.0% | 86.1% |
| 3262383 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.58 | 53.0 | 4.78e-01 | 100.0% | 75.6% |
| 3934889 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.58 | 53.0 | 4.88e-01 | 100.0% | 80.8% |
| 3927453 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.58 | 51.0 | 4.68e-01 | 100.0% | 73.3% |
| 3933233 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.57 | 52.0 | 4.74e-01 | 100.0% | 76.2% |
| 3940715 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.57 | 51.0 | 4.65e-01 | 100.0% | 75.6% |
| 5043517 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.57 | 50.0 | 4.01e-01 | 100.0% | 50.0% |
| 3932481 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.57 | 51.0 | 4.69e-01 | 100.0% | 79.2% |
| 3930501 | 2484.5.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase | 0.57 | 52.0 | 4.79e-01 | 100.0% | 81.6% |
| 4954830 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.56 | 46.0 | 3.82e-01 | 100.0% | 48.4% |
| 3586413 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.55 | 38.0 | 3.49e-01 | 80.0% | 53.1% |
| 3460760 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.54 | 49.0 | 4.26e-01 | 100.0% | 72.9% |
| 3679402 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 46.0 | 3.99e-01 | 97.0% | 80.0% |
| 3819047 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.53 | 46.0 | 4.13e-01 | 98.0% | 78.6% |
| 3454249 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 46.0 | 4.56e-01 | 99.0% | 100.0% |
D2
medium
residues 101-175
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3oyxA02 | 1.20.58.1560 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 29.0 | 3.12e-01 | 93.3% | 44.8% |
| 4h9nC00 | 1.20.58.2170 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 34.0 | 2.56e-01 | 76.0% | 23.4% |
| 6o0aA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 42.0 | 3.48e-01 | 89.3% | 85.9% |
| 8jpdG01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.53 | 41.0 | 3.38e-01 | 85.3% | 77.9% |
| 2gslF00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.53 | 41.0 | 3.49e-01 | 85.3% | 78.7% |
| 4uw9A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.52 | 36.0 | 3.54e-01 | 72.0% | 85.5% |
| 3rjtA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.52 | 42.0 | 3.15e-01 | 93.3% | 78.5% |
| 4g80T00 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.52 | 39.0 | 3.26e-01 | 82.7% | 78.4% |
| 3ezhA00 | 1.20.120.960 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase NarX, sensor domain | 0.52 | 36.0 | 3.21e-01 | 74.7% | 83.3% |
| 1gq2A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 40.0 | 2.71e-01 | 85.3% | 24.3% |
| 3b0cW00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.51 | 34.0 | 3.43e-01 | 77.3% | 69.9% |
| 8b9zK01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 33.0 | 3.16e-01 | 81.3% | 54.9% |
| 1cnt200 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.50 | 35.0 | 3.02e-01 | 74.7% | 94.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3668287 | 601.2.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr | 0.60 | 36.0 | 3.21e-01 | 72.0% | 40.0% |
| 4459277 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.54 | 36.0 | 3.34e-01 | 88.0% | 53.7% |
| 3961186 | 103.9.1.0 ↗ | alpha arrays › RuvA-C › RanGAP2 N-terminal domain › RanGAP2 N-terminal domain | 0.53 | 43.0 | 3.99e-01 | 92.0% | 92.0% |
| 3978820 | 4952.1.1.1 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_1 | 0.52 | 35.0 | 3.13e-01 | 88.0% | 49.5% |
| 3359312 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.52 | 31.0 | 3.17e-01 | 80.0% | 60.0% |
| 4541657 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.51 | 36.0 | 3.62e-01 | 97.3% | 71.2% |
| 3727675 | 109.4.1.681 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 | 0.51 | 41.0 | 2.58e-01 | 93.3% | 26.4% |
| 3287085 | 192.29.1.55 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF5313 | 0.51 | 35.0 | 3.30e-01 | 73.3% | 74.7% |