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IMGVR_UViG_3300018080_003942-3300018080-Ga0180433_1000026949

Arc-Vir

IMGVR_UViG_3300018080_003942-3300018080-Ga0180433_1000026949

Identity

Kingdom:
archaea

Quality

60.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-122
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.61 48.0 4.85e-01 84.6% 94.1%
1ikpA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 52.0 4.07e-01 97.1% 97.3%
5ocqA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 50.0 3.69e-01 96.2% 94.1%
3ligA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.56 48.0 4.15e-01 96.2% 97.6%
1mveA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 50.0 3.84e-01 100.0% 78.9%
1e2tA02 3.30.1120.150 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.56 36.0 3.93e-01 89.4% 79.1%
5nslA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.55 48.0 3.94e-01 97.1% 82.1%
1w2tA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.55 49.0 4.48e-01 97.1% 93.3%
5dzeA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 49.0 3.96e-01 100.0% 97.5%
3bywC00 2.60.120.610 Mainly Beta › Sandwich › Jelly Rolls › arabinofuranosyltransferase like domain 0.54 38.0 3.27e-01 72.1% 85.0%
3kwrA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 35.0 3.83e-01 83.7% 81.9%
3fy6A01 3.30.2210.10 Alpha Beta › 2-Layer Sandwich › Integron cassette protein fold › Integron cassette protein superfamily 0.53 39.0 3.92e-01 77.9% 94.4%
1y7bA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 3.80e-01 100.0% 71.3%
3unbF00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.53 44.0 3.39e-01 92.3% 83.6%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 32.0 3.82e-01 85.6% 93.9%
2jh3A03 3.30.1360.190 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.53 47.0 4.66e-01 99.0% 100.0%
8ep4C01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 45.0 3.43e-01 97.1% 93.0%
1q47A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 40.0 2.57e-01 80.8% 44.0%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 36.0 3.90e-01 78.8% 90.5%
5tf2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 34.0 2.44e-01 70.2% 87.0%
1wgqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 34.0 3.43e-01 70.2% 98.2%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5053646 331.2.1.0 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.62 30.0 3.34e-01 99.0% 55.3%
3271615 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 42.0 2.74e-01 75.0% 70.7%
1098 10.1.1.29 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Exotox-A_bind 0.58 52.0 3.96e-01 100.0% 78.7%
4929701 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.58 34.0 4.18e-01 90.4% 100.0%
3779299 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.57 41.0 2.57e-01 76.9% 29.6%
3516693 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.56 31.0 3.05e-01 92.3% 47.0%
4967355 4100.1.1.3 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.55 35.0 4.12e-01 75.0% 100.0%
5067008 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.55 47.0 3.78e-01 95.2% 87.6%
3787520 5.1.4.56 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NUP214 0.53 39.0 2.64e-01 76.0% 59.5%
3214923 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.52 42.0 3.52e-01 89.4% 59.0%
3410220 5.1.4.218 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT80_2nd 0.52 37.0 2.72e-01 75.0% 99.3%
4025061 5.1.4.263 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR3_2nd 0.51 37.0 2.48e-01 75.0% 82.6%
3479152 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 40.0 2.78e-01 82.7% 35.8%
4237612 3006.1.1.6 ↗ a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › CPSF73-100_C 0.51 38.0 4.15e-01 99.0% 96.5%
3709573 5.1.4.302 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EML 0.51 38.0 2.78e-01 80.8% 95.8%
4383447 5.1.4.62 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.50 39.0 2.57e-01 82.7% 48.2%
3498461 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.50 36.0 2.51e-01 75.0% 94.5%