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IMGVR_UViG_3300018080_003942-3300018080-Ga0180433_1000026977

Arc-Vir

IMGVR_UViG_3300018080_003942-3300018080-Ga0180433_1000026977

Identity

Kingdom:
archaea

Quality

95.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-190_283-298
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6cl5A01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 33.0 4.52e-01 76.7% 100.0%
2xdhA00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 26.0 3.17e-01 75.7% 58.7%
2pn5A10 2.60.40.690 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain 0.59 27.0 3.23e-01 76.2% 59.6%
2pmwB02 2.60.120.690 Mainly Beta › Sandwich › Jelly Rolls › Proprotein convertase subtilisin/kexin type 9 0.58 51.0 5.15e-01 99.0% 93.3%
3fcsA03 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.56 28.0 3.30e-01 77.2% 66.2%
5zbeA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 25.0 3.35e-01 79.6% 80.4%
3kptA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 28.0 3.33e-01 76.7% 70.2%
2qjvA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 27.0 3.52e-01 73.3% 88.5%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964117 4182.1.1.3 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C 0.77 34.0 5.00e-01 76.2% 91.6%
3588730 4182.1.1.0 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.76 33.0 4.85e-01 76.7% 89.5%
4936904 4182.1.1.0 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.70 33.0 4.81e-01 79.6% 97.9%
2491354 4182.1.1.3 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C 0.68 33.0 4.75e-01 87.4% 100.0%
3969203 4182.1.1.0 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.64 34.0 4.41e-01 77.2% 89.6%
3572503 11.1.1.297 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.59 30.0 3.51e-01 77.2% 66.2%
4029291 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 29.0 3.44e-01 76.2% 66.4%
3285854 4182.1.1.0 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.57 33.0 4.09e-01 77.2% 91.5%
3401442 11.1.1.297 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.56 27.0 3.30e-01 77.2% 68.1%
5039010 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 31.0 3.86e-01 76.7% 86.9%
3989692 4081.1.1.12 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF2207 0.55 28.0 2.85e-01 76.2% 45.7%
2512673 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 32.0 3.93e-01 80.6% 92.9%
4471982 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.54 29.0 2.86e-01 80.1% 46.1%
4651258 11.1.5.107 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Candida_ALS_N 0.53 27.0 3.09e-01 76.2% 64.0%
3992318 10.32.1.177 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › UPF0669 0.52 32.0 3.86e-01 82.5% 91.9%
3528113 12.5.1.2 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › GPS 0.52 28.0 3.12e-01 77.7% 62.9%
4944856 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.52 30.0 3.84e-01 78.6% 98.3%
D2 medium residues 191-282_299-365
PDB
Domain cluster: rep: IMGVR_UViG_3300018080_003942-3300018080-Ga0180433_1000026977__D1-190_283-298
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vm9A02 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 38.0 4.74e-01 99.4% 92.9%
2pmwB02 2.60.120.690 Mainly Beta › Sandwich › Jelly Rolls › Proprotein convertase subtilisin/kexin type 9 0.63 51.0 4.63e-01 100.0% 64.9%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1714453 11.21.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like 0.66 38.0 4.91e-01 100.0% 96.8%
3249250 4182.1.1.2 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › H_lectin 0.66 38.0 4.80e-01 100.0% 94.7%
3598457 11.1.1.981 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7497 0.56 34.0 3.96e-01 97.5% 83.5%
5013684 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.55 30.0 3.11e-01 82.4% 54.7%
3274204 12.5.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.52 30.0 3.09e-01 81.8% 58.0%