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IMGVR_UViG_3300018407_000228-3300018407-Ga0187900_10161289

Arc-Vir

IMGVR_UViG_3300018407_000228-3300018407-Ga0187900_10161289

Quality

79.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-84
PDB
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 49.0 5.60e-01 75.6% 90.0%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.75 52.0 5.67e-01 78.0% 89.4%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 51.0 5.55e-01 78.0% 90.9%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.70 49.0 5.56e-01 78.0% 100.0%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 46.0 5.28e-01 70.7% 100.0%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.67 53.0 5.06e-01 84.1% 81.7%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.64 48.0 4.13e-01 82.9% 72.5%
6b9tF01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 37.0 3.23e-01 82.9% 38.4%
1genA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.61 42.0 3.19e-01 72.0% 36.5%
6vtmB00 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.61 47.0 4.46e-01 80.5% 99.0%
1yn3A00 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.61 47.0 4.43e-01 81.7% 99.0%
1wp5A00 2.120.10.90 Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal 0.60 49.0 3.28e-01 89.0% 35.4%
5ja1B00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.60 34.0 3.71e-01 78.0% 68.2%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 40.0 4.37e-01 85.4% 87.5%
2z8lA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.60 45.0 4.01e-01 80.5% 85.5%
4e2tB00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.59 41.0 3.25e-01 72.0% 44.4%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.59 41.0 3.21e-01 70.7% 41.8%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.59 41.0 3.24e-01 72.0% 42.0%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 39.0 4.24e-01 73.2% 84.6%
1et9A01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.58 43.0 3.87e-01 78.0% 91.8%
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.57 40.0 3.15e-01 72.0% 43.9%
1at0A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.57 39.0 3.27e-01 72.0% 49.7%
2pstX00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.57 32.0 3.62e-01 78.0% 73.8%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.56 44.0 3.88e-01 84.1% 92.5%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 43.0 3.03e-01 84.1% 26.5%
1jx4A04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.55 43.0 4.04e-01 82.9% 84.7%
3jscA00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 3.80e-01 76.8% 84.4%
5owvD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 35.0 2.58e-01 79.3% 24.3%
5jv4A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 38.0 3.21e-01 73.2% 95.8%
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.55 43.0 3.92e-01 85.4% 76.6%
3etbL00 2.60.40.810 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 47.0 3.97e-01 98.8% 67.1%
2f4nB02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.54 39.0 3.79e-01 76.8% 92.6%
4kncA02 2.60.120.1380 Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module 0.54 41.0 3.69e-01 81.7% 87.2%
1qr4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 4.10e-01 87.8% 79.3%
2asfA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 38.0 3.31e-01 74.4% 96.0%
2dlgA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 4.01e-01 82.9% 81.2%
5escA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 37.0 3.35e-01 74.4% 98.3%
4j2gA00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.53 42.0 3.16e-01 86.6% 62.9%
2re7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 36.0 3.10e-01 72.0% 50.8%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 36.0 3.22e-01 73.2% 91.1%
1oeyL00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 40.0 3.86e-01 97.6% 71.4%
1rfeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 36.0 3.08e-01 72.0% 43.4%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 36.0 2.91e-01 72.0% 47.2%
1wgyA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 39.0 4.08e-01 82.9% 100.0%
2lw3A00 2.60.40.2880 Mainly Beta › Sandwich › Immunoglobulin-like › MmpS1-5, C-terminal soluble domain 0.51 33.0 3.24e-01 80.5% 58.9%
2imzA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.51 34.0 2.95e-01 70.7% 99.3%
3f7eA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 36.0 3.10e-01 75.6% 47.7%
3u9sE04 3.30.700.40 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.50 35.0 3.15e-01 74.4% 75.2%
4trtA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.50 39.0 3.54e-01 87.8% 90.8%
1vq8E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.50 36.0 3.72e-01 75.6% 87.3%
4r8tB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.50 34.0 3.56e-01 73.2% 78.1%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4937731 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 57.0 6.56e-01 75.6% 98.3%
4945344 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 54.0 3.56e-01 79.3% 18.2%
5004476 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 52.0 5.79e-01 79.3% 86.2%
4478186 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 43.0 5.42e-01 70.7% 100.0%
4451993 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.76 51.0 5.79e-01 79.3% 95.0%
5080336 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 54.0 5.98e-01 80.5% 95.3%
4499953 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.75 50.0 5.71e-01 79.3% 95.0%
5045214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 57.0 6.12e-01 80.5% 94.3%
4084850 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 52.0 5.77e-01 78.0% 92.3%
4010681 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.73 54.0 5.17e-01 80.5% 67.4%
5040888 4.1.1.301 beta barrels › SH3 › SH3 › SH3 › MJ1316 0.72 54.0 5.52e-01 79.3% 86.3%
4185009 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 52.0 5.71e-01 80.5% 95.4%
4941512 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 48.0 5.10e-01 78.0% 80.0%
4104821 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 52.0 5.44e-01 81.7% 84.0%
4969566 4.1.1.301 beta barrels › SH3 › SH3 › SH3 › MJ1316 0.71 53.0 5.44e-01 79.3% 87.5%
5073888 4.1.2.2 beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 0.71 53.0 5.39e-01 79.3% 87.5%
4342110 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 52.0 5.48e-01 81.7% 86.3%
4940673 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 50.0 5.64e-01 78.0% 100.0%
4292822 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 53.0 5.51e-01 79.3% 88.0%
4432457 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 51.0 5.48e-01 81.7% 90.0%
4124780 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 51.0 5.42e-01 81.7% 86.3%
4216845 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 51.0 5.40e-01 81.7% 86.3%
4212091 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 51.0 5.58e-01 81.7% 96.9%
4584943 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 50.0 5.41e-01 80.5% 88.6%
4505797 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 51.0 5.64e-01 81.7% 96.9%
4660084 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 52.0 5.55e-01 80.5% 94.2%
4347922 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 48.0 5.37e-01 76.8% 98.3%
3387119 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.69 52.0 5.09e-01 81.7% 76.7%
4286562 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 49.0 5.42e-01 80.5% 95.4%
5033892 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 51.0 5.63e-01 80.5% 100.0%
4527355 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 50.0 5.39e-01 81.7% 92.8%
4429329 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 48.0 5.26e-01 78.0% 93.8%
5013637 221.1.3.1 a+b two layers › beta-Grasp › Ubiquitin-related › Sulfite oxidase, middle catalytic domain › Oxidored_molyb 0.67 54.0 4.25e-01 85.4% 86.1%
4476045 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 50.0 5.35e-01 82.9% 92.9%
4118226 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 50.0 5.37e-01 85.4% 94.3%
4261362 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 50.0 5.37e-01 80.5% 94.3%
4299932 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 49.0 5.40e-01 82.9% 100.0%
4995694 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 43.0 4.97e-01 70.7% 100.0%
4302032 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 49.0 5.37e-01 80.5% 100.0%
4088209 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 48.0 5.21e-01 80.5% 98.5%
140040 4216.1.1.3 a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › LFE_1968-like 0.64 48.0 4.13e-01 82.9% 72.5%
3967527 4216.1.1.1 a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › HemS 0.63 50.0 4.03e-01 89.0% 58.0%
3925408 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 36.0 4.33e-01 70.7% 98.0%
4033546 221.1.1.20 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › MAP 0.60 46.0 4.19e-01 81.7% 87.3%
4975578 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.60 42.0 2.89e-01 73.2% 24.7%
3927663 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 38.0 4.13e-01 74.4% 80.0%
5022295 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.59 41.0 3.25e-01 72.0% 41.2%
5013038 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.59 41.0 3.29e-01 72.0% 39.4%
5025279 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 47.0 4.15e-01 84.1% 72.2%
3511375 4.1.1.349 beta barrels › SH3 › SH3 › SH3 › ROF 0.59 43.0 4.32e-01 79.3% 81.2%
4039971 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.59 41.0 3.18e-01 72.0% 44.6%
4993480 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.58 41.0 3.28e-01 73.2% 38.7%
2709685 221.1.1.17 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Stap_Strp_tox_C 0.58 47.0 4.28e-01 86.6% 94.4%
4997604 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.58 41.0 3.19e-01 73.2% 38.8%
5062749 4.1.1.30 beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.58 43.0 3.85e-01 79.3% 83.3%
3928295 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.57 47.0 3.55e-01 90.2% 61.0%
3781730 5.1.11.3 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Utp8_b_propeller 0.56 39.0 2.51e-01 72.0% 20.0%
3278636 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.55 40.0 3.22e-01 75.6% 86.5%
5076084 230.1.1.3 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.54 39.0 3.27e-01 75.6% 54.4%
3231860 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 38.0 3.38e-01 74.4% 75.0%
4930433 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.53 36.0 3.02e-01 70.7% 93.5%
4975825 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.52 36.0 3.01e-01 72.0% 41.7%
3955284 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.51 38.0 3.19e-01 78.0% 80.0%
3881277 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 40.0 3.73e-01 82.9% 76.0%
3945554 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.51 38.0 3.64e-01 82.9% 68.4%
4931996 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.51 37.0 3.28e-01 79.3% 54.1%
3785886 1.1.5.18 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 0.50 36.0 2.75e-01 75.6% 79.5%