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IMGVR_UViG_3300018407_000337-3300018407-Ga0187900_10011026

Arc-Vir

IMGVR_UViG_3300018407_000337-3300018407-Ga0187900_10011026

Quality

78.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 33-149
PDB
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.74 67.0 5.88e-01 99.1% 90.6%
3hlzB01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.73 68.0 6.37e-01 100.0% 91.4%
4esqA00 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.72 63.0 5.37e-01 97.4% 97.4%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.71 65.0 5.96e-01 100.0% 97.4%
7cu8E01 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.70 63.0 5.41e-01 98.3% 100.0%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.69 62.0 5.78e-01 96.6% 97.9%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.65 58.0 5.52e-01 98.3% 90.4%
2zfdB00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.64 49.0 4.97e-01 79.5% 80.2%
5a67A00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.64 46.0 3.83e-01 75.2% 97.6%
1d1jB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.61 55.0 5.22e-01 97.4% 100.0%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.61 44.0 4.45e-01 73.5% 100.0%
1mhmA00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.61 46.0 3.59e-01 78.6% 54.2%
4hesA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.59 53.0 4.03e-01 98.3% 100.0%
1yemB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.59 42.0 3.75e-01 73.5% 100.0%
4btfA03 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 40.0 4.16e-01 77.8% 73.2%
2q83B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 44.0 4.75e-01 82.9% 92.9%
2ex2A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 49.0 3.86e-01 91.5% 100.0%
5tvfD00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.58 46.0 3.55e-01 84.6% 54.4%
2wuqB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 48.0 3.71e-01 91.5% 98.9%
2xepB02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 49.0 3.81e-01 92.3% 99.2%
4h05B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 43.0 4.78e-01 78.6% 100.0%
3cjmA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 51.0 4.04e-01 100.0% 99.2%
2bkkA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 42.0 4.66e-01 77.8% 97.8%
3kmuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 38.0 4.33e-01 76.9% 90.8%
3rjuA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.57 50.0 3.62e-01 97.4% 98.9%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 42.0 4.08e-01 76.9% 88.0%
5lohB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 33.0 4.03e-01 76.9% 90.5%
1g1bA00 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.56 42.0 3.73e-01 77.8% 78.7%
1p9rA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.56 37.0 3.86e-01 82.9% 71.2%
1o07A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 49.0 3.52e-01 98.3% 100.0%
6kbyA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 49.0 3.50e-01 100.0% 98.6%
5ctnA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 47.0 3.82e-01 94.9% 97.9%
3p24A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.54 44.0 4.02e-01 86.3% 94.1%
3i1aA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 41.0 4.36e-01 80.3% 97.1%
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 40.0 3.87e-01 76.1% 89.3%
5fl3A01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.54 36.0 3.92e-01 83.8% 80.0%
3w7tA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.54 41.0 3.22e-01 100.0% 39.7%
3g2fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 36.0 4.07e-01 76.1% 90.8%
4gdnC00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.54 47.0 3.43e-01 96.6% 99.4%
3v39A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.54 47.0 3.78e-01 98.3% 91.2%
3aoxA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 33.0 3.60e-01 76.1% 75.0%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.53 34.0 3.96e-01 71.8% 90.5%
1ei5A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 43.0 3.18e-01 89.7% 98.4%
4e6xB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 46.0 3.47e-01 100.0% 99.3%
3dxpA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 38.0 4.19e-01 82.1% 98.9%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3597443 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.79 73.0 6.67e-01 99.1% 98.0%
4953412 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.79 72.0 7.03e-01 97.4% 99.2%
4954483 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.78 73.0 7.15e-01 100.0% 100.0%
4957957 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.77 69.0 5.84e-01 97.4% 96.3%
3961090 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.77 70.0 6.63e-01 100.0% 99.3%
3714612 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.75 69.0 6.12e-01 100.0% 97.6%
3324335 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.75 68.0 5.99e-01 100.0% 98.2%
3817626 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.73 67.0 5.75e-01 99.1% 98.3%
5036897 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.73 67.0 6.23e-01 100.0% 96.6%
3968112 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.73 66.0 6.03e-01 99.1% 99.4%
3295586 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.72 65.0 5.82e-01 99.1% 98.2%
3952435 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.72 65.0 5.61e-01 98.3% 98.9%
2771892 881.1.1.8 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PknH_C 0.71 64.0 5.38e-01 98.3% 94.8%
3959601 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.71 62.0 5.30e-01 96.6% 97.9%
3283279 881.1.1.15 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3558 0.70 64.0 6.18e-01 99.1% 99.2%
4093191 331.2.1.0 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.69 43.0 4.60e-01 75.2% 71.2%
4940816 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.69 52.0 5.69e-01 90.6% 97.9%
3624850 331.9.1.9 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 0.68 43.0 4.53e-01 98.3% 70.5%
3438388 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.68 51.0 4.87e-01 79.5% 67.4%
None 0.68 52.0 3.47e-01 80.3% 22.1%
4451360 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.65 50.0 3.83e-01 80.3% 65.4%
7054 881.2.1.1 a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like › DUF3242 0.65 58.0 5.70e-01 99.1% 96.9%
3222106 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 58.0 5.80e-01 97.4% 99.2%
3323226 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.64 58.0 5.36e-01 100.0% 94.7%
4132512 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.63 49.0 3.55e-01 84.6% 74.3%
3599120 331.10.1.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase 0.63 49.0 3.53e-01 84.6% 74.9%
3252765 223.2.1.1 a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.62 55.0 5.23e-01 95.7% 96.3%
4768813 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.62 46.0 3.79e-01 78.6% 63.1%
3283094 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.61 48.0 4.00e-01 82.1% 57.9%
4294460 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.61 43.0 3.22e-01 72.6% 76.1%
3353407 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.61 47.0 3.44e-01 82.9% 76.1%
5045322 331.6.1.0 a+b two layers › TBP-like › MoaD-related protein, C-terminal domain › MoaD-related protein, C-terminal domain 0.60 46.0 4.54e-01 80.3% 80.8%
3260117 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.60 46.0 3.36e-01 82.1% 74.9%
3305495 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.60 46.0 3.34e-01 82.1% 76.8%
4034412 809.1.1.6 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › PF27443 0.60 49.0 4.71e-01 86.3% 93.8%
3255497 12.3.1.46 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD 0.60 43.0 3.51e-01 75.2% 96.9%
4285781 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.60 43.0 3.17e-01 73.5% 73.4%
3282852 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.60 47.0 4.27e-01 82.9% 77.4%
4216191 3844.1.1.1 a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C 0.58 40.0 4.21e-01 72.6% 78.1%
3367922 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.58 36.0 3.91e-01 73.5% 74.7%
3289656 331.3.1.26 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2867 0.58 46.0 4.19e-01 82.9% 80.0%
3589588 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.58 44.0 3.37e-01 84.6% 35.6%
4046583 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.56 42.0 4.04e-01 76.1% 89.2%
4392904 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.56 44.0 3.32e-01 82.9% 84.6%
3783819 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.56 44.0 3.16e-01 84.6% 48.6%
4962132 300.1.1.18 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle 0.56 42.0 3.82e-01 79.5% 86.9%
4136892 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.56 33.0 3.87e-01 76.9% 85.0%
3895278 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 43.0 2.55e-01 82.9% 10.6%
3258903 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.55 37.0 2.87e-01 76.1% 30.8%
4937958 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.55 42.0 3.07e-01 82.1% 29.5%
3630305 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 43.0 2.53e-01 82.9% 34.9%
4622009 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 43.0 2.55e-01 82.9% 11.1%
3752441 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.54 39.0 3.92e-01 97.4% 73.3%
4926836 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 49.0 4.80e-01 99.1% 100.0%
3602995 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.54 43.0 4.42e-01 87.2% 91.3%
4030694 304.107.1.7 a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › POP1_N+POPLD 0.52 44.0 3.26e-01 93.2% 74.7%
4964119 300.1.1.18 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle 0.52 42.0 3.78e-01 86.3% 93.8%
3783266 223.2.1.33 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.51 40.0 3.99e-01 84.6% 92.0%