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IMGVR_UViG_3300018412_000002-3300018412-Ga0194136_10000798
Arc-VirIMGVR_UViG_3300018412_000002-3300018412-Ga0194136_10000798
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-90
Domain cluster:
rep: OP918262.1__WAS28504.1__X__00058__D1-114
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 44.0 | 5.06e-01 | 83.7% | 92.1% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 49.0 | 5.33e-01 | 80.2% | 93.1% |
| 3a2yA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.64 | 47.0 | 3.72e-01 | 79.1% | 45.4% |
| 3l6pA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.64 | 41.0 | 3.91e-01 | 81.4% | 54.3% |
| 3h6zA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 54.0 | 4.91e-01 | 91.9% | 74.1% |
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.63 | 37.0 | 3.73e-01 | 79.1% | 54.9% |
| 5zwzA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 45.0 | 4.90e-01 | 75.6% | 92.9% |
| 3otpA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.61 | 46.0 | 3.47e-01 | 82.6% | 33.5% |
| 3bbaA00 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.61 | 46.0 | 3.30e-01 | 79.1% | 32.1% |
| 2dhkA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 43.0 | 4.12e-01 | 73.3% | 80.0% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 44.0 | 4.20e-01 | 91.9% | 65.0% |
| 6ijfC01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.61 | 37.0 | 3.64e-01 | 79.1% | 54.8% |
| 1v89A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 43.0 | 3.91e-01 | 74.4% | 74.6% |
| 4ic5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 47.0 | 4.39e-01 | 82.6% | 67.3% |
| 4lduA03 | 2.30.30.1040 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 42.0 | 4.68e-01 | 72.1% | 100.0% |
| 4hhvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 43.0 | 4.08e-01 | 75.6% | 76.7% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.59 | 40.0 | 4.50e-01 | 79.1% | 98.3% |
| 1u5dA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 42.0 | 3.94e-01 | 74.4% | 80.6% |
| 2dfkC02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 42.0 | 3.61e-01 | 75.6% | 64.5% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.58 | 41.0 | 4.52e-01 | 83.7% | 95.5% |
| 1u17A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 47.0 | 3.80e-01 | 94.2% | 88.1% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.56 | 42.0 | 4.36e-01 | 77.9% | 100.0% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.56 | 41.0 | 4.25e-01 | 77.9% | 100.0% |
| 2bhgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 41.0 | 3.95e-01 | 82.6% | 66.7% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.55 | 41.0 | 3.86e-01 | 79.1% | 92.4% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 41.0 | 3.92e-01 | 79.1% | 69.0% |
| 2aq6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 42.0 | 3.59e-01 | 82.6% | 51.0% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.55 | 42.0 | 4.22e-01 | 80.2% | 100.0% |
| 1tqzA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 39.0 | 3.51e-01 | 76.7% | 83.7% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 41.0 | 3.74e-01 | 82.6% | 68.4% |
| 2asfA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 38.0 | 3.41e-01 | 80.2% | 52.8% |
| 1p4xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 3.55e-01 | 81.4% | 67.7% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 41.0 | 3.16e-01 | 82.6% | 42.4% |
| 1vx7N01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 43.0 | 4.35e-01 | 87.2% | 98.8% |
| 7mi4A01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.52 | 41.0 | 3.17e-01 | 86.0% | 84.6% |
| 8es5A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 36.0 | 3.13e-01 | 73.3% | 73.9% |
| 4jglA00 | 2.40.128.530 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 41.0 | 3.48e-01 | 89.5% | 92.1% |
| 7eu1A01 | 1.10.274.100 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 | 0.50 | 44.0 | 3.81e-01 | 100.0% | 93.0% |
| 2ox7A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.50 | 37.0 | 3.96e-01 | 87.2% | 98.6% |
| 2nn5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 35.0 | 2.82e-01 | 72.1% | 56.7% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3516333 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 46.0 | 5.60e-01 | 77.9% | 96.4% |
| 3502086 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 46.0 | 5.50e-01 | 90.7% | 100.0% |
| 3553983 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.72 | 49.0 | 5.73e-01 | 79.1% | 100.0% |
| 3510676 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 47.0 | 4.58e-01 | 80.2% | 61.1% |
| 3502388 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 46.0 | 4.87e-01 | 77.9% | 74.7% |
| 3241817 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 48.0 | 5.57e-01 | 82.6% | 100.0% |
| 3236689 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 44.0 | 5.35e-01 | 76.7% | 100.0% |
| 3609031 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 46.0 | 4.43e-01 | 79.1% | 59.0% |
| 4995699 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 49.0 | 5.35e-01 | 86.0% | 94.3% |
| 3457163 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.66 | 48.0 | 4.96e-01 | 81.4% | 81.2% |
| 4586356 | 220.1.1.81 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF2550 | 0.66 | 46.0 | 3.94e-01 | 72.1% | 69.6% |
| 3958057 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 45.0 | 3.91e-01 | 72.1% | 69.6% |
| 3702924 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.65 | 48.0 | 3.63e-01 | 79.1% | 39.5% |
| 3358748 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.65 | 49.0 | 5.05e-01 | 77.9% | 93.8% |
| 3373583 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.64 | 49.0 | 5.39e-01 | 84.9% | 100.0% |
| 3615787 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.63 | 44.0 | 3.21e-01 | 82.6% | 27.6% |
| 3592541 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 46.0 | 4.81e-01 | 88.4% | 82.5% |
| 3583485 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.63 | 54.0 | 5.08e-01 | 97.7% | 76.2% |
| 3830352 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.63 | 50.0 | 5.05e-01 | 83.7% | 94.1% |
| 3650296 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.63 | 49.0 | 4.71e-01 | 81.4% | 82.1% |
| 3774692 | 4.1.1.31 ↗ | beta barrels › SH3 › SH3 › SH3 › Spin-Ssty | 0.62 | 47.0 | 4.86e-01 | 80.2% | 86.3% |
| 3176049 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.62 | 44.0 | 4.86e-01 | 83.7% | 92.8% |
| 3628131 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 47.0 | 4.44e-01 | 91.9% | 68.0% |
| 3342814 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 50.0 | 4.82e-01 | 84.9% | 88.4% |
| 3828371 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 48.0 | 4.90e-01 | 84.9% | 83.5% |
| 3416068 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.62 | 46.0 | 3.80e-01 | 79.1% | 72.3% |
| 3592307 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 46.0 | 3.47e-01 | 79.1% | 43.3% |
| 3411714 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 46.0 | 5.05e-01 | 80.2% | 95.7% |
| 3815495 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.61 | 45.0 | 4.93e-01 | 81.4% | 95.7% |
| 4990503 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.61 | 48.0 | 4.25e-01 | 84.9% | 59.2% |
| 3423906 | 4.25.1.1 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › Auxin_resp | 0.61 | 44.0 | 4.87e-01 | 76.7% | 98.6% |
| 4139778 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.61 | 44.0 | 4.68e-01 | 80.2% | 89.0% |
| 4342110 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.60 | 40.0 | 4.30e-01 | 80.2% | 82.2% |
| 3587906 | 4.1.1.46 ↗ | beta barrels › SH3 › SH3 › SH3 › VEG | 0.58 | 44.0 | 4.55e-01 | 80.2% | 91.3% |
| 4302032 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.58 | 41.0 | 4.62e-01 | 80.2% | 100.0% |
| 3259583 | 220.1.1.86 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N | 0.58 | 41.0 | 4.22e-01 | 73.3% | 88.7% |
| 3998029 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 43.0 | 4.06e-01 | 79.1% | 79.0% |
| 3658643 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.58 | 52.0 | 4.33e-01 | 97.7% | 82.1% |
| 3224730 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 43.0 | 3.99e-01 | 79.1% | 93.6% |
| 4104821 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.57 | 39.0 | 4.18e-01 | 83.7% | 82.7% |
| 4625374 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.56 | 43.0 | 3.19e-01 | 82.6% | 32.2% |
| 4938399 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.56 | 40.0 | 3.74e-01 | 75.6% | 80.0% |
| 4927385 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.56 | 33.0 | 4.00e-01 | 70.9% | 100.0% |
| 4574546 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.56 | 40.0 | 4.38e-01 | 80.2% | 100.0% |
| 4248855 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.56 | 41.0 | 4.41e-01 | 80.2% | 97.3% |
| 4216845 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.55 | 40.0 | 4.30e-01 | 80.2% | 91.8% |
| 4122525 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.55 | 40.0 | 4.20e-01 | 80.2% | 89.3% |
| 3961371 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.55 | 42.0 | 4.34e-01 | 83.7% | 87.5% |
| 3291157 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.55 | 40.0 | 3.39e-01 | 79.1% | 47.1% |
| 4429352 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 42.0 | 4.13e-01 | 80.2% | 83.3% |
| 4387111 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.53 | 40.0 | 4.12e-01 | 80.2% | 98.8% |
| 138887 | 1.1.5.32 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZNR | 0.53 | 41.0 | 3.73e-01 | 82.6% | 66.7% |
| 4028659 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 41.0 | 4.26e-01 | 83.7% | 98.8% |
| 3618922 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.53 | 44.0 | 4.32e-01 | 93.0% | 92.6% |
| 3941320 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.52 | 41.0 | 4.34e-01 | 95.3% | 98.7% |
| 3794450 | 219.1.1.25 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT | 0.51 | 41.0 | 3.48e-01 | 91.9% | 83.2% |
| 3264641 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.50 | 36.0 | 2.30e-01 | 75.6% | 29.4% |
| 5041453 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.50 | 37.0 | 3.76e-01 | 80.2% | 80.0% |
| 3266903 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 37.0 | 3.45e-01 | 79.1% | 78.2% |
| 2084828 | 304.165.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › Ta1207 | 0.50 | 34.0 | 2.88e-01 | 70.9% | 96.1% |