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IMGVR_UViG_3300018412_000002-3300018412-Ga0194136_100007988

Arc-Vir

IMGVR_UViG_3300018412_000002-3300018412-Ga0194136_100007988

Identity

Kingdom:
archaea

Quality

95.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-72_94-111
PDB
Domain cluster: rep: SRR1747035_scaffold_2_prodigal-single.1__X__X__00126__D1-82
D2 medium residues 73-93_112-184
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vqrD00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.65 59.0 4.21e-01 100.0% 54.5%
8st7C01 1.10.4140.10 Mainly Alpha › Orthogonal Bundle › effector protein (NleL) fold › effector protein (NleL) 0.60 47.0 3.74e-01 87.2% 98.5%
3ccyA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 43.0 3.75e-01 77.7% 72.1%
7y4rB01 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.55 40.0 3.90e-01 77.7% 69.8%
1sgmA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 39.0 3.19e-01 76.6% 54.9%
4ls9B01 3.90.1640.10 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › inorganic pyrophosphatase (n-terminal core) 0.53 41.0 3.37e-01 87.2% 80.6%
1ouvA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 40.0 3.02e-01 86.2% 41.5%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.76e-01 95.7% 71.4%
2ivxB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.51 38.0 3.36e-01 97.9% 52.1%
2elcA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.51 34.0 3.96e-01 71.3% 97.0%
4by6D02 1.25.40.800 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 39.0 3.03e-01 84.0% 48.9%
3lomA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.51 40.0 3.02e-01 92.6% 76.4%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5004908 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.86 82.0 6.27e-01 100.0% 57.9%
5082828 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.81 78.0 6.10e-01 100.0% 59.6%
3589751 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.79 70.0 5.89e-01 100.0% 60.0%
4098537 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.78 61.0 5.47e-01 100.0% 60.8%
4930032 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.75 69.0 5.48e-01 95.7% 52.9%
3959695 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.68 61.0 5.28e-01 100.0% 72.4%
5043683 2006.1.2.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.58 42.0 3.36e-01 75.5% 88.9%
3814573 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 41.0 3.95e-01 95.7% 68.6%
5048828 2006.1.2.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.53 43.0 3.42e-01 91.5% 66.7%
3258991 101.26.1.2 ↗ alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › HTH_44 0.53 39.0 3.63e-01 100.0% 60.0%
4948515 2006.1.2.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.53 43.0 3.48e-01 90.4% 71.1%
5055142 2006.1.2.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.53 43.0 3.41e-01 90.4% 65.5%
5066592 1030.1.1.0 ↗ alpha duplicates or obligate multimers › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 0.52 39.0 3.91e-01 95.7% 79.0%
4995877 2006.1.2.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.51 40.0 3.30e-01 90.4% 68.7%