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IMGVR_UViG_3300018424_003621-3300018424-Ga0181591_100324067

Arc-Vir

IMGVR_UViG_3300018424_003621-3300018424-Ga0181591_100324067

Identity

Kingdom:
archaea

Quality

88.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-90
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1f1sA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.74 44.0 4.61e-01 71.9% 64.6%
1n7oA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.71 42.0 4.37e-01 71.9% 62.4%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 44.0 4.18e-01 94.4% 55.6%
3fbxA00 3.60.60.30 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › 0.65 46.0 2.84e-01 73.0% 61.9%
1okeB02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.64 37.0 3.95e-01 100.0% 64.9%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.61 36.0 4.00e-01 98.9% 73.2%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 43.0 3.97e-01 84.3% 62.6%
2chrA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 45.0 4.02e-01 87.6% 60.6%
1ln1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 37.0 2.81e-01 73.0% 30.5%
3f9sB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 37.0 3.19e-01 73.0% 53.2%
7ccbA01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.53 43.0 3.64e-01 87.6% 89.0%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 39.0 3.74e-01 100.0% 68.6%
1milA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 45.0 4.33e-01 100.0% 91.3%
2ntkB00 3.60.20.20 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Inosine monophosphate cyclohydrolase-like 0.50 42.0 3.29e-01 94.4% 90.1%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.50 39.0 3.22e-01 85.4% 85.0%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3234993 210.1.2.6 ↗ a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Phospholip_B 0.65 46.0 2.87e-01 74.2% 59.4%
4774106 210.1.2.6 ↗ a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Phospholip_B 0.65 46.0 3.08e-01 73.0% 94.4%
3175626 331.1.1.13 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C 0.64 32.0 3.45e-01 73.0% 54.7%
3648118 3270.1.1.0 ↗ a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase 0.62 49.0 4.97e-01 96.6% 86.7%
3458732 243.3.1.19 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.61 39.0 4.79e-01 74.2% 98.3%
4275209 4237.1.1.1 ↗ beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.60 41.0 3.22e-01 71.9% 33.9%
3427749 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.60 41.0 4.70e-01 94.4% 95.4%
4028777 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.60 51.0 3.03e-01 97.8% 13.2%
3863194 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.57 45.0 4.03e-01 87.6% 76.9%
3682599 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.56 41.0 2.59e-01 100.0% 13.6%
4022601 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.56 42.0 3.97e-01 86.5% 64.5%
3706026 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.56 37.0 2.84e-01 84.3% 29.8%
3924550 4026.1.1.0 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.54 49.0 4.06e-01 100.0% 60.0%
3595430 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.54 49.0 3.74e-01 100.0% 66.5%
4986251 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.54 40.0 4.08e-01 91.0% 80.0%
4985991 206.1.2.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › SAICAR_synt 0.54 38.0 2.61e-01 75.3% 49.1%
3445416 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 43.0 2.90e-01 91.0% 29.4%
3472659 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.52 45.0 3.90e-01 96.6% 80.7%
4235474 4237.1.1.1 ↗ beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.52 38.0 3.16e-01 83.1% 42.1%
3738197 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.52 44.0 3.61e-01 93.3% 79.4%
3615220 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.52 46.0 3.71e-01 100.0% 68.6%
4927556 2011.2.1.7 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 0.52 41.0 3.15e-01 88.8% 88.0%
3507400 210.1.2.6 ↗ a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Phospholip_B 0.51 47.0 2.89e-01 100.0% 42.6%