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IMGVR_UViG_3300018427_001526-3300018427-Ga0187903_100111804

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300018427_001526-3300018427-Ga0187903_100111804 ↗
Kingdom:: archaea

Quality

74.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-57

PDB

D2 medium residues 58-125

PDB

D3 medium residues 127-256

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02037.34 best	SAP	36.5	3.90e-09	28.5%	86.5%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4rs8A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.71	39.0	4.74e-01	100.0%	83.3%
2x4hA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.69	38.0	3.83e-01	99.2%	53.5%
1on2A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.67	37.0	4.75e-01	99.2%	97.2%
2fxaA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.66	39.0	3.69e-01	100.0%	48.7%
1z05A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.65	36.0	4.76e-01	93.8%	100.0%
2pbiA02	1.10.1240.60	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 ›	0.52	30.0	3.35e-01	100.0%	71.3%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4033136	130.1.1.1 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP	0.80	34.0	5.30e-01	78.5%	96.4%
4189928	130.1.1.0 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif	0.67	36.0	4.92e-01	70.8%	100.0%

D4 medium residues 261-424

PDB

Domain cluster: representative

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3ro3A00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.60	42.0	4.31e-01	93.3%	73.0%
1rz4A01	1.25.40.250	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat; domain 1	0.59	36.0	4.09e-01	91.5%	81.7%
4yvoA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.59	40.0	4.57e-01	92.1%	95.8%
2c2lA01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.58	37.0	4.08e-01	95.1%	78.2%
4gyoA02	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.57	43.0	3.87e-01	76.8%	64.1%
1zb1A00	1.25.40.280	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains	0.55	44.0	3.48e-01	86.6%	75.2%
3gw4A00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.54	42.0	4.06e-01	100.0%	70.3%
2ifuD00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.54	44.0	3.72e-01	89.6%	52.6%
2qfcA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.53	43.0	3.57e-01	100.0%	49.6%
2vq2A00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.52	38.0	3.51e-01	95.7%	56.4%
4jhrB00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.52	44.0	3.64e-01	97.6%	51.6%
2ho1B00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.51	39.0	3.54e-01	95.7%	59.3%
4i1aA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.50	42.0	3.53e-01	98.2%	53.3%

ECOD (14)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4999446	109.4.1.198 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12	0.63	44.0	3.71e-01	94.5%	42.4%
3657962	109.4.1.218 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAP	0.59	44.0	3.66e-01	78.0%	47.8%
3786264	109.4.1.1237 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NTS_TR130	0.59	41.0	4.55e-01	84.1%	92.8%
3337178	109.4.1.198 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12	0.58	39.0	3.95e-01	90.2%	65.9%
3327912	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.56	38.0	3.60e-01	92.7%	56.4%
3704998	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.56	43.0	4.16e-01	78.0%	74.4%
3254748	109.4.1.198 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12	0.55	43.0	4.17e-01	93.3%	72.4%
3301655	109.4.1.218 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAP	0.55	42.0	4.32e-01	84.8%	83.9%
3496785	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.54	41.0	3.34e-01	77.4%	42.0%
3178016	3924.1.1.1 ↗	alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Fungal_trans_2	0.54	48.0	3.59e-01	97.6%	43.7%
3502049	109.4.1.30 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT	0.52	40.0	2.79e-01	80.5%	47.9%
3284554	109.4.1.1320 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_10, TPR_12	0.51	40.0	4.09e-01	100.0%	85.2%
3515023	109.4.1.1433 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_8, TPR_12	0.51	45.0	3.80e-01	95.7%	85.7%
5073700	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.51	44.0	4.30e-01	95.7%	90.8%