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IMGVR_UViG_3300018428_007217-3300018428-Ga0181568_100059151

Arc-Vir

IMGVR_UViG_3300018428_007217-3300018428-Ga0181568_100059151

Quality

86.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-65
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 52.0 4.64e-01 73.4% 56.0%
3j7aV00 2.40.50.1000 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 53.0 4.16e-01 89.1% 69.9%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 48.0 5.28e-01 92.2% 100.0%
5aj3Q00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 50.0 4.25e-01 84.4% 76.1%
3qcmA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.65 48.0 3.14e-01 79.7% 22.4%
2vg9A00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.62 45.0 3.13e-01 78.1% 35.0%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 49.0 3.96e-01 85.9% 79.7%
4wrnA02 2.60.40.3210 Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-N domain 0.61 44.0 3.78e-01 76.6% 91.4%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 42.0 4.18e-01 73.4% 88.4%
3en2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 42.0 3.78e-01 73.4% 60.4%
3afcA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 50.0 2.99e-01 92.2% 19.0%
2jbrA02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.59 44.0 3.83e-01 78.1% 100.0%
5b4wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 50.0 3.02e-01 93.8% 34.6%
1k1yB02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 47.0 3.19e-01 89.1% 54.0%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 45.0 4.00e-01 98.4% 55.0%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 41.0 3.20e-01 75.0% 43.9%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.58 42.0 3.27e-01 76.6% 65.1%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.58 38.0 3.61e-01 95.3% 53.8%
3t1oA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 42.0 3.06e-01 78.1% 32.3%
1pn2B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 48.0 3.71e-01 93.8% 53.4%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.57 42.0 4.30e-01 89.1% 83.3%
1gydB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 48.0 3.10e-01 95.3% 70.2%
3bb9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 47.0 3.82e-01 93.8% 93.6%
3imhA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 45.0 2.89e-01 89.1% 98.2%
2bbhA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.56 42.0 3.21e-01 81.2% 87.4%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 48.0 4.14e-01 96.9% 87.4%
3g8zA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 45.0 3.61e-01 89.1% 82.8%
1ju2A02 3.30.410.40 Alpha Beta › 2-Layer Sandwich › Cholesterol Oxidase; domain 2 › 0.55 45.0 3.28e-01 92.2% 43.6%
4ydzA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 41.0 3.32e-01 84.4% 53.3%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 41.0 3.92e-01 79.7% 79.7%
1iicA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 41.0 2.89e-01 89.1% 39.9%
3wp4A00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.54 39.0 2.72e-01 78.1% 24.1%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 44.0 3.84e-01 100.0% 74.3%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.53 42.0 4.44e-01 85.9% 98.2%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.53 39.0 3.61e-01 79.7% 76.2%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.53 30.0 2.99e-01 84.4% 52.3%
3ig4A02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.52 40.0 2.71e-01 82.8% 38.3%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.52 45.0 3.87e-01 96.9% 73.5%
2i5hA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 36.0 3.51e-01 73.4% 65.3%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 42.0 3.51e-01 95.3% 91.7%
1kyfA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.51 39.0 3.31e-01 85.9% 86.7%
1sp8C02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 41.0 2.94e-01 93.8% 93.4%
2kxgA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 42.0 3.79e-01 96.9% 80.0%
7w3rB01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.50 40.0 2.66e-01 95.3% 52.4%
1sg5A01 2.30.30.400 Mainly Beta › Roll › SH3 type barrels. › Rof-like 0.50 41.0 3.99e-01 100.0% 81.8%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4281699 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 65.0 6.22e-01 100.0% 78.7%
4073433 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.78 67.0 6.23e-01 100.0% 76.2%
4340758 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 66.0 6.40e-01 100.0% 87.1%
4078162 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 61.0 5.85e-01 100.0% 79.7%
3272363 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.72 61.0 5.34e-01 98.4% 63.2%
4947171 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.70 55.0 4.69e-01 85.9% 81.0%
4233828 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.69 52.0 4.60e-01 81.2% 80.0%
4990259 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.69 53.0 4.28e-01 85.9% 66.2%
3169095 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.67 50.0 4.58e-01 81.2% 90.6%
3990202 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 51.0 4.20e-01 81.2% 90.0%
3421524 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 52.0 3.19e-01 89.1% 22.2%
3688447 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.65 51.0 4.13e-01 89.1% 93.8%
3740784 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 56.0 5.14e-01 100.0% 77.6%
3188394 4.8.1.22 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.64 55.0 4.53e-01 100.0% 67.5%
3865594 11.1.1.640 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N 0.64 48.0 4.03e-01 81.2% 80.0%
4990980 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.63 48.0 4.28e-01 84.4% 58.9%
3608102 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 42.0 4.09e-01 70.3% 77.1%
5007802 331.4.1.36 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › PF27851 0.61 39.0 3.72e-01 84.4% 52.5%
3544903 5.1.4.13 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP 0.61 52.0 3.21e-01 98.4% 93.7%
4947640 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.61 47.0 3.11e-01 82.8% 76.1%
3595169 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 54.0 5.29e-01 100.0% 95.7%
5019498 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 47.0 4.00e-01 84.4% 83.8%
3614586 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.60 48.0 4.01e-01 96.9% 49.2%
3393619 284.4.1.2 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain › PF28923 0.59 37.0 4.02e-01 71.9% 82.0%
4808081 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.58 48.0 4.11e-01 93.8% 80.9%
3696336 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 39.0 3.49e-01 70.3% 85.3%
3389979 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.58 45.0 3.74e-01 85.9% 59.2%
4974362 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.58 46.0 3.07e-01 85.9% 54.8%
4990210 283.2.1.8 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29994 0.57 46.0 4.03e-01 87.5% 62.1%
3229319 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 50.0 4.22e-01 100.0% 72.7%
5038030 327.16.1.1 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin 0.56 43.0 2.96e-01 87.5% 95.5%
5012271 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.56 46.0 2.92e-01 90.6% 25.4%
3380753 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.56 43.0 3.93e-01 85.9% 72.2%
3616441 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.56 43.0 3.55e-01 84.4% 74.2%
4056691 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.56 44.0 3.65e-01 89.1% 67.5%
3938884 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 42.0 3.69e-01 85.9% 80.0%
4013811 4.8.1.22 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.55 47.0 4.27e-01 98.4% 84.4%
3188712 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.55 47.0 4.09e-01 96.9% 79.0%
5045679 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 37.0 3.03e-01 70.3% 82.4%
3923465 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 42.0 3.69e-01 87.5% 67.6%
3401290 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 43.0 3.58e-01 87.5% 59.2%
3377087 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 44.0 2.79e-01 93.8% 34.1%
3627506 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 41.0 3.54e-01 85.9% 65.5%
5012336 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.53 41.0 3.05e-01 84.4% 94.2%
3536857 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.53 44.0 3.30e-01 92.2% 81.2%
3472421 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 43.0 3.60e-01 98.4% 88.5%
3486945 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.53 43.0 3.59e-01 98.4% 88.5%
5054294 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 41.0 3.63e-01 87.5% 84.0%
3479176 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.53 41.0 3.91e-01 89.1% 75.0%
3490957 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 41.0 4.00e-01 89.1% 96.0%
3918299 4.1.1.376 beta barrels › SH3 › SH3 › SH3 › Chromo_MORC2_6th 0.53 43.0 4.23e-01 96.9% 84.3%
3410286 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.53 42.0 3.81e-01 93.8% 82.1%
3631313 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.52 45.0 3.29e-01 98.4% 41.1%
3494009 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.52 41.0 3.72e-01 89.1% 66.7%
5066083 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.52 35.0 2.57e-01 71.9% 56.5%
3185466 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.51 39.0 2.86e-01 87.5% 34.0%
3205559 4.8.1.22 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.51 38.0 3.10e-01 87.5% 46.9%
3562855 11.1.1.614 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_ZP2 0.51 36.0 3.13e-01 79.7% 94.8%
4640369 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 39.0 3.45e-01 89.1% 61.0%
3761138 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.50 39.0 3.35e-01 89.1% 56.5%
4524129 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.50 39.0 3.49e-01 87.5% 71.6%
3692065 301.7.1.0 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like 0.50 39.0 2.62e-01 89.1% 42.0%