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IMGVR_UViG_3300018490_000273-3300018490-Ga0193584_10694833
Arc-VirIMGVR_UViG_3300018490_000273-3300018490-Ga0193584_10694833
Identity
- Kingdom:
- archaea
Quality
70.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-86
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 47.0 | 4.18e-01 | 97.1% | 48.0% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.68 | 35.0 | 3.15e-01 | 70.0% | 35.4% |
| 3oc4A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 45.0 | 3.71e-01 | 72.9% | 99.2% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 42.0 | 4.42e-01 | 97.1% | 78.3% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.61 | 43.0 | 4.54e-01 | 74.3% | 86.7% |
| 1w5rA01 | 3.30.2140.10 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase | 0.61 | 40.0 | 3.01e-01 | 100.0% | 27.7% |
| 3p54A02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.58 | 38.0 | 3.84e-01 | 97.1% | 66.2% |
| 3igfA02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 48.0 | 4.72e-01 | 88.6% | 89.2% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.57 | 39.0 | 4.14e-01 | 97.1% | 84.7% |
| 4gp0B02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.57 | 42.0 | 3.56e-01 | 80.0% | 100.0% |
| 1l9fA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 46.0 | 3.39e-01 | 90.0% | 70.9% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 40.0 | 4.19e-01 | 98.6% | 83.1% |
| 4cbvA02 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.56 | 43.0 | 3.68e-01 | 91.4% | 50.0% |
| 1gmiA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.56 | 49.0 | 4.02e-01 | 100.0% | 65.9% |
| 2gcjA01 | 2.30.29.150 | Mainly Beta › Roll › PH-domain like › | 0.55 | 49.0 | 3.95e-01 | 100.0% | 85.1% |
| 4o5vA03 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.55 | 43.0 | 4.25e-01 | 97.1% | 81.6% |
| 4ifsA01 | 2.30.29.150 | Mainly Beta › Roll › PH-domain like › | 0.54 | 48.0 | 3.94e-01 | 100.0% | 86.4% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 46.0 | 3.72e-01 | 97.1% | 50.0% |
| 1o70A02 | 2.30.180.10 | Mainly Beta › Roll › FAS1 domain › FAS1 domain | 0.54 | 37.0 | 2.90e-01 | 100.0% | 32.1% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.54 | 45.0 | 3.77e-01 | 100.0% | 83.3% |
| 2ywlA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 45.0 | 3.41e-01 | 92.9% | 93.0% |
| 3lovA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 45.0 | 3.46e-01 | 91.4% | 77.0% |
| 2fhdA02 | 2.30.30.810 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 44.0 | 4.42e-01 | 98.6% | 90.3% |
| 4pbdA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 42.0 | 3.78e-01 | 88.6% | 68.6% |
| 2bzyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 32.0 | 3.38e-01 | 85.7% | 66.1% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 37.0 | 3.87e-01 | 84.3% | 82.8% |
| 4n6rB00 | 2.60.40.3960 | Mainly Beta › Sandwich › Immunoglobulin-like › Velvet domain | 0.53 | 46.0 | 3.36e-01 | 100.0% | 59.6% |
| 2gumB03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.52 | 46.0 | 3.87e-01 | 100.0% | 76.9% |
| 6ghmC02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 35.0 | 3.68e-01 | 71.4% | 96.9% |
| 1yqeA01 | 3.40.630.50 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › AF0625-like | 0.52 | 37.0 | 2.68e-01 | 74.3% | 81.7% |
| 1bymA00 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.52 | 43.0 | 3.90e-01 | 95.7% | 67.0% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 39.0 | 4.03e-01 | 97.1% | 86.8% |
| 5f7uA02 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.52 | 40.0 | 2.84e-01 | 85.7% | 37.6% |
| 3d6wB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 39.0 | 3.99e-01 | 91.4% | 82.9% |
| 1nr0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 45.0 | 2.96e-01 | 98.6% | 93.3% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 44.0 | 3.75e-01 | 100.0% | 67.7% |
| 2yq2A01 | 2.60.320.20 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › Pestivirus envelope glycoprotein E2, domain A | 0.51 | 43.0 | 4.06e-01 | 100.0% | 92.0% |
| 1vx7H01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.51 | 35.0 | 3.35e-01 | 87.1% | 60.0% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 38.0 | 4.12e-01 | 81.4% | 100.0% |
| 4a17E01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.51 | 34.0 | 3.30e-01 | 85.7% | 58.8% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995694 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 58.0 | 6.46e-01 | 85.7% | 100.0% |
| 4478186 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 46.0 | 5.49e-01 | 98.6% | 97.8% |
| 5063433 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 49.0 | 5.56e-01 | 94.3% | 100.0% |
| 4332042 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 49.0 | 4.93e-01 | 78.6% | 72.9% |
| 4149821 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 46.0 | 4.92e-01 | 75.7% | 81.7% |
| 4359892 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.67 | 49.0 | 4.70e-01 | 97.1% | 67.5% |
| 4931543 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.66 | 45.0 | 3.00e-01 | 70.0% | 58.9% |
| 4476045 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.66 | 48.0 | 4.87e-01 | 78.6% | 81.4% |
| 5066458 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.66 | 49.0 | 3.81e-01 | 80.0% | 71.3% |
| 4226934 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.64 | 45.0 | 4.64e-01 | 72.9% | 78.5% |
| 1482194 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.64 | 42.0 | 4.42e-01 | 97.1% | 78.3% |
| 4527355 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.64 | 47.0 | 4.81e-01 | 91.4% | 81.2% |
| 4969727 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.63 | 49.0 | 3.74e-01 | 84.3% | 66.3% |
| 3509390 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.62 | 45.0 | 3.77e-01 | 77.1% | 87.5% |
| 4342110 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.62 | 46.0 | 4.63e-01 | 81.4% | 79.5% |
| 4981604 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.62 | 48.0 | 3.70e-01 | 84.3% | 69.0% |
| 5076084 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.62 | 48.0 | 3.76e-01 | 84.3% | 75.2% |
| 4505797 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.61 | 45.0 | 4.64e-01 | 78.6% | 86.2% |
| 3387119 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.61 | 44.0 | 4.09e-01 | 77.1% | 62.2% |
| 3821919 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.61 | 40.0 | 4.30e-01 | 98.6% | 80.0% |
| 4104821 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.60 | 47.0 | 4.60e-01 | 92.9% | 78.7% |
| 3959450 | 3504.2.1.1 ↗ | beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco | 0.59 | 50.0 | 4.21e-01 | 95.7% | 72.5% |
| 4992470 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.57 | 44.0 | 4.69e-01 | 87.1% | 96.7% |
| 3991244 | 4.1.1.243 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa | 0.57 | 36.0 | 4.10e-01 | 71.4% | 97.8% |
| 3908567 | 391.1.1.13 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › VWC2L_2nd | 0.57 | 26.0 | 2.88e-01 | 95.7% | 49.1% |
| 4965146 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.57 | 47.0 | 2.96e-01 | 91.4% | 77.3% |
| 4352331 | 101.1.2.788 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF29760 | 0.55 | 38.0 | 3.51e-01 | 71.4% | 90.0% |
| 185084 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.54 | 38.0 | 4.13e-01 | 91.4% | 89.8% |
| 4027872 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 46.0 | 4.19e-01 | 100.0% | 87.4% |
| 5073888 | 4.1.2.2 ↗ | beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 | 0.52 | 43.0 | 4.17e-01 | 100.0% | 87.5% |
| 3267416 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.52 | 38.0 | 3.74e-01 | 82.9% | 82.5% |
| 3286642 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 39.0 | 3.38e-01 | 81.4% | 82.7% |
| 3946976 | 2003.1.2.161 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › PF30338 | 0.52 | 45.0 | 3.31e-01 | 94.3% | 56.0% |
| 3907934 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 3.89e-01 | 100.0% | 79.1% |
| 3838921 | 318.1.1.0 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 | 0.51 | 36.0 | 3.51e-01 | 74.3% | 83.7% |
| 3926701 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.51 | 38.0 | 3.92e-01 | 95.7% | 85.3% |
| 1442686 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.51 | 34.0 | 3.30e-01 | 85.7% | 58.8% |
| 4990499 | 2003.1.5.32 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Cons_hypoth95 | 0.50 | 38.0 | 2.61e-01 | 82.9% | 58.9% |