←Back to structures
IMGVR_UViG_3300018494_004126-3300018494-Ga0187911_100791009
Arc-VirIMGVR_UViG_3300018494_004126-3300018494-Ga0187911_100791009
Identity
- Kingdom:
- archaea
Quality
74.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-49
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jsgA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.70 | 53.0 | 4.08e-01 | 83.3% | 77.5% |
| 3pieC05 | 2.170.260.40 | Mainly Beta › Beta Complex › paz domain › | 0.63 | 45.0 | 3.16e-01 | 79.2% | 61.1% |
| 3nfwA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 50.0 | 3.46e-01 | 95.8% | 68.7% |
| 1a1xA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.62 | 49.0 | 3.89e-01 | 91.7% | 80.2% |
| 2iz4A01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.61 | 37.0 | 3.75e-01 | 100.0% | 57.1% |
| 3pftA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 50.0 | 3.60e-01 | 97.9% | 78.2% |
| 1y14D02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 42.0 | 3.48e-01 | 72.9% | 98.9% |
| 4clfA02 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.60 | 47.0 | 3.31e-01 | 95.8% | 62.5% |
| 3b5mA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 48.0 | 3.71e-01 | 95.8% | 93.3% |
| 2ra1A04 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 46.0 | 3.84e-01 | 93.8% | 71.1% |
| 2asbA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 39.0 | 3.38e-01 | 70.8% | 89.3% |
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 43.0 | 4.30e-01 | 81.2% | 78.0% |
| 1tm0A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.58 | 41.0 | 3.05e-01 | 77.1% | 41.1% |
| 1zpsA01 | 3.10.20.810 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase | 0.57 | 45.0 | 3.77e-01 | 95.8% | 60.0% |
| 4ympA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 42.0 | 3.41e-01 | 89.6% | 75.9% |
| 2aneH00 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.56 | 41.0 | 3.34e-01 | 85.4% | 79.8% |
| 1xg9A02 | 3.10.25.20 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › | 0.55 | 40.0 | 3.78e-01 | 81.2% | 90.3% |
| 5j39A01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 39.0 | 3.07e-01 | 81.2% | 88.9% |
| 5lm7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 38.0 | 3.35e-01 | 77.1% | 70.5% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 40.0 | 3.69e-01 | 83.3% | 73.8% |
| 3mahA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 37.0 | 3.45e-01 | 97.9% | 55.1% |
| 2wanA01 | 2.60.40.1130 | Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain | 0.53 | 40.0 | 3.41e-01 | 91.7% | 67.4% |
| 4g6xA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 44.0 | 3.30e-01 | 97.9% | 84.5% |
| 2apoA03 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 42.0 | 3.53e-01 | 95.8% | 51.1% |
| 6vilA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.52 | 39.0 | 2.96e-01 | 87.5% | 80.0% |
| 2ynaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 41.0 | 3.60e-01 | 100.0% | 95.5% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 41.0 | 3.02e-01 | 100.0% | 68.7% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 39.0 | 3.50e-01 | 87.5% | 72.6% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5019257 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.83 | 71.0 | 4.36e-01 | 100.0% | 16.9% |
| 4032268 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 50.0 | 4.07e-01 | 70.8% | 43.8% |
| 3525036 | 58.1.1.1 ↗ | beta barrels › Oncogene product-like › Oncogene products › Oncogene products › TCL1_MTCP1 | 0.72 | 53.0 | 4.06e-01 | 81.2% | 87.8% |
| 3702029 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.65 | 41.0 | 2.69e-01 | 81.2% | 13.8% |
| 4481026 | 4.1.1.407 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29661 | 0.61 | 41.0 | 3.85e-01 | 72.9% | 55.0% |
| 3912824 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.61 | 48.0 | 3.96e-01 | 91.7% | 63.2% |
| 3631913 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 45.0 | 2.74e-01 | 85.4% | 16.8% |
| 4029093 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 42.0 | 2.98e-01 | 72.9% | 27.1% |
| 4872438 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.61 | 44.0 | 4.10e-01 | 81.2% | 84.4% |
| 3738922 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.61 | 41.0 | 2.98e-01 | 72.9% | 100.0% |
| 3658421 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.59 | 36.0 | 3.12e-01 | 75.0% | 37.3% |
| 4032337 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.59 | 40.0 | 2.81e-01 | 70.8% | 24.8% |
| 4938828 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 42.0 | 3.93e-01 | 77.1% | 65.0% |
| 3511593 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.57 | 48.0 | 3.28e-01 | 100.0% | 42.0% |
| 3977035 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.57 | 38.0 | 3.84e-01 | 70.8% | 68.8% |
| 5068820 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 41.0 | 3.72e-01 | 83.3% | 53.3% |
| 3174977 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.56 | 38.0 | 3.13e-01 | 72.9% | 63.2% |
| 5004050 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 39.0 | 3.52e-01 | 75.0% | 52.9% |
| 3227940 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.55 | 43.0 | 2.92e-01 | 100.0% | 23.0% |
| 4284709 | 4.1.1.111 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_RapA | 0.55 | 37.0 | 3.64e-01 | 77.1% | 63.6% |
| 3344575 | 9.26.1.0 ↗ | beta barrels › Lipocalins/Streptavidin | 0.54 | 41.0 | 2.94e-01 | 95.8% | 90.3% |
| 3928786 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.54 | 44.0 | 2.99e-01 | 100.0% | 25.6% |
| 4974669 | 4.1.1.458 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2098 | 0.53 | 36.0 | 3.04e-01 | 72.9% | 44.4% |
| 3340613 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 41.0 | 3.60e-01 | 93.8% | 68.8% |
| 3719677 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 41.0 | 3.02e-01 | 95.8% | 81.9% |
| 4654417 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.52 | 38.0 | 3.19e-01 | 85.4% | 45.0% |
| 3837995 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 37.0 | 3.56e-01 | 75.0% | 65.5% |
| 3373338 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.52 | 38.0 | 2.54e-01 | 81.2% | 39.1% |
| 3799069 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.52 | 41.0 | 2.58e-01 | 93.8% | 27.4% |
| 3894747 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 42.0 | 2.93e-01 | 95.8% | 48.6% |
| 3458388 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.51 | 39.0 | 2.71e-01 | 85.4% | 51.1% |
| 3898182 | 2485.1.1.69 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DUF4174 | 0.51 | 35.0 | 2.64e-01 | 72.9% | 47.1% |
| 3624143 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.51 | 38.0 | 3.68e-01 | 91.7% | 70.9% |
| 3943930 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.51 | 32.0 | 3.20e-01 | 70.8% | 58.0% |
| 3277860 | 4.1.1.368 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3097_N | 0.51 | 36.0 | 3.32e-01 | 77.1% | 61.5% |
| 3180816 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 42.0 | 2.92e-01 | 100.0% | 54.6% |
| 3618406 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.50 | 37.0 | 3.11e-01 | 83.3% | 81.1% |