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IMGVR_UViG_3300018938_000085-3300018938-Ga0193542_100011041
Arc-VirIMGVR_UViG_3300018938_000085-3300018938-Ga0193542_100011041
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 278-486_648-712
Domain cluster:
rep: OM654377.1__UNY40333.1__KLEP7_gp197__00197__D5-152_207-277
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 144.4 | 6.70e-42 | 77.4% | 33.6% |
| PF02867.21 | Ribonuc_red_lgC | 39.7 | 3.60e-10 | 21.5% | 10.5% |
D2
high
residues 536-643
Domain cluster:
rep: IMGVR_UViG_3300005521_000790-3300005521-Ga0066862_100070041__D34-122
D3
medium
residues 1-76
Domain cluster:
rep: Rr1__YP_002854736__Euproctis_pseudoconspersa_nucleopolyhedrovirus__307467__D239-293
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 67.8 | 1.10e-18 | 100.0% | 14.5% |
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wghA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.97 | 94.0 | 5.30e-01 | 100.0% | 12.0% |
| 1xjkA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.93 | 84.0 | 4.80e-01 | 100.0% | 11.5% |
| 1peqA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.91 | 81.0 | 4.77e-01 | 100.0% | 14.9% |
| 1r1rA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.85 | 80.0 | 4.69e-01 | 100.0% | 15.0% |
| 3hm2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.69 | 48.0 | 3.68e-01 | 97.4% | 32.2% |
| 3nzpB02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.68 | 59.0 | 4.11e-01 | 100.0% | 32.6% |
| 6whcA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 59.0 | 4.24e-01 | 98.7% | 45.7% |
| 1z85B02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.65 | 49.0 | 3.98e-01 | 96.1% | 41.6% |
| 4l69A02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.65 | 55.0 | 4.22e-01 | 97.4% | 40.9% |
| 5jvkA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 56.0 | 3.71e-01 | 98.7% | 29.9% |
| 2a4aA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 53.0 | 3.72e-01 | 100.0% | 28.4% |
| 3c3kB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 44.0 | 3.62e-01 | 98.7% | 44.8% |
| 3floA02 | 3.60.21.60 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › | 0.59 | 50.0 | 3.63e-01 | 100.0% | 33.9% |
| 4i6vA01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.59 | 51.0 | 3.32e-01 | 100.0% | 21.8% |
| 1nvmA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 47.0 | 3.29e-01 | 100.0% | 25.6% |
| 5karA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.58 | 50.0 | 3.21e-01 | 100.0% | 26.3% |
| 5by3A02 | 3.20.20.520 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosyl hydrolase family 115 | 0.58 | 50.0 | 3.37e-01 | 100.0% | 25.7% |
| 3kbrA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 40.0 | 3.28e-01 | 85.5% | 40.0% |
| 3hv1B01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 41.0 | 3.23e-01 | 86.8% | 37.3% |
| 1h8eG02 | 3.40.1380.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit | 0.57 | 44.0 | 3.39e-01 | 84.2% | 86.5% |
| 2p5yA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.56 | 45.0 | 4.04e-01 | 100.0% | 62.2% |
| 4hea600 | 3.40.50.12280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 38.0 | 3.06e-01 | 100.0% | 34.2% |
| 3lzdA03 | 3.40.50.11860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Diphthamide synthesis DPH1/DPH2 domain 3 | 0.55 | 36.0 | 3.35e-01 | 93.4% | 50.0% |
| 3v8vA01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.54 | 45.0 | 3.35e-01 | 96.1% | 34.0% |
| 2xbuA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 47.0 | 3.53e-01 | 100.0% | 68.0% |
| 1qi9A00 | 1.10.606.10 | Mainly Alpha › Orthogonal Bundle › Vanadium-containing Chloroperoxidase; domain 2 › Vanadium-containing Chloroperoxidase, domain 2 | 0.54 | 47.0 | 2.83e-01 | 100.0% | 37.8% |
| 7drdG01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.53 | 45.0 | 3.18e-01 | 100.0% | 29.4% |
| 6i3mG01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.52 | 37.0 | 2.60e-01 | 76.3% | 31.2% |
| 1i24A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.52 | 45.0 | 3.74e-01 | 100.0% | 64.8% |
| 3cb2A02 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.51 | 42.0 | 3.98e-01 | 96.1% | 74.7% |
| 3oonA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.50 | 42.0 | 3.82e-01 | 100.0% | 88.5% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5058546 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.98 | 95.0 | 5.41e-01 | 100.0% | 12.9% |
| 5030208 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.97 | 93.0 | 5.30e-01 | 100.0% | 12.4% |
| 4564490 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.97 | 93.0 | 5.37e-01 | 100.0% | 13.6% |
| 4190659 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.97 | 94.0 | 5.28e-01 | 100.0% | 11.6% |
| 4015532 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.97 | 93.0 | 5.34e-01 | 100.0% | 13.4% |
| 3823652 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.96 | 93.0 | 5.32e-01 | 100.0% | 13.6% |
| 4298539 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.96 | 92.0 | 5.32e-01 | 100.0% | 14.2% |
| 4145444 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.93 | 88.0 | 5.13e-01 | 100.0% | 14.5% |
| 3972491 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.93 | 88.0 | 5.08e-01 | 100.0% | 13.2% |
| 3963206 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.93 | 88.0 | 5.10e-01 | 100.0% | 14.1% |
| 3942765 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.93 | 88.0 | 5.11e-01 | 100.0% | 14.3% |
| 3500621 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 88.0 | 5.13e-01 | 100.0% | 14.6% |
| 3958480 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 87.0 | 5.33e-01 | 100.0% | 20.5% |
| 4934525 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 86.0 | 5.01e-01 | 100.0% | 13.9% |
| 4067125 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 86.0 | 5.06e-01 | 100.0% | 14.9% |
| 3590466 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 86.0 | 5.01e-01 | 100.0% | 13.9% |
| 996122 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 87.0 | 4.97e-01 | 100.0% | 13.2% |
| 5063882 | 1074.1.1.6 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgC | 0.91 | 86.0 | 5.34e-01 | 100.0% | 21.4% |
| 4994375 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.90 | 85.0 | 4.98e-01 | 100.0% | 15.2% |
| 5056523 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.74 | 43.0 | 3.45e-01 | 98.7% | 30.7% |
| 3962958 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.70 | 46.0 | 3.53e-01 | 100.0% | 30.0% |
| 4011358 | 2003.1.7.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like | 0.68 | 52.0 | 3.61e-01 | 100.0% | 24.3% |
| 4973581 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.68 | 55.0 | 3.76e-01 | 100.0% | 24.2% |
| 3182453 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 57.0 | 4.66e-01 | 98.7% | 67.8% |
| 3597121 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 56.0 | 3.72e-01 | 100.0% | 57.6% |
| None | — | 0.60 | 54.0 | 3.96e-01 | 100.0% | 74.0% | |
| 4017507 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 52.0 | 4.02e-01 | 100.0% | 65.7% |
| 3982647 | 2002.1.2.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › Hypothetical protein Cthe_0052 › DUF4434 | 0.59 | 50.0 | 3.96e-01 | 100.0% | 43.4% |
| 5045428 | 2002.1.2.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › Hypothetical protein Cthe_0052 | 0.59 | 48.0 | 4.20e-01 | 97.4% | 91.5% |
| 5077380 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.58 | 49.0 | 4.32e-01 | 94.7% | 80.9% |
| 3271689 | 2004.1.1.98 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad17 | 0.58 | 51.0 | 3.29e-01 | 100.0% | 40.3% |
| 3910768 | 2004.1.1.152 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KAP_NTPase | 0.56 | 49.0 | 3.51e-01 | 98.7% | 84.3% |
| None | — | 0.56 | 48.0 | 3.26e-01 | 100.0% | 31.6% | |
| 3690425 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.55 | 46.0 | 3.08e-01 | 96.1% | 39.4% |
| 5056877 | 2007.6.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI | 0.54 | 45.0 | 2.92e-01 | 97.4% | 18.0% |
| 3660768 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.54 | 46.0 | 3.90e-01 | 100.0% | 58.5% |
| 4025441 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 46.0 | 3.14e-01 | 100.0% | 37.0% |
| 3791731 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.53 | 47.0 | 3.60e-01 | 100.0% | 69.1% |
| 5070118 | 4143.1.1.0 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like | 0.52 | 45.0 | 4.33e-01 | 93.4% | 83.5% |
| 3228939 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.52 | 45.0 | 3.72e-01 | 100.0% | 75.2% |
D4
medium
residues 77-187
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4k0dA00 | 1.20.120.1730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.66 | 58.0 | 5.29e-01 | 95.5% | 100.0% |
| 1k32A03 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.62 | 27.0 | 3.33e-01 | 91.9% | 62.5% |
| 3nrxA00 | 1.20.58.1520 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 42.0 | 4.08e-01 | 70.3% | 81.3% |
| 1vpdA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.60 | 47.0 | 4.42e-01 | 81.1% | 74.8% |
| 3vadA01 | 1.20.140.20 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Alpha-ketoacid/pyruvate dehydrogenase kinase, N-terminal domain | 0.58 | 37.0 | 3.33e-01 | 100.0% | 44.9% |
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.58 | 45.0 | 4.43e-01 | 82.0% | 89.1% |
| 7p2yd01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.55 | 39.0 | 4.13e-01 | 80.2% | 83.8% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.54 | 42.0 | 4.08e-01 | 84.7% | 93.6% |
| 3kflA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.53 | 40.0 | 3.50e-01 | 80.2% | 100.0% |
| 1lb3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 38.0 | 3.33e-01 | 82.0% | 49.1% |
| 3u66A00 | 1.25.40.590 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU | 0.51 | 36.0 | 3.19e-01 | 73.0% | 89.9% |
| 7dl9A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.51 | 40.0 | 3.38e-01 | 85.6% | 64.4% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3503255 | 4003.1.1.1 ↗ | alpha arrays › Helical bundle domain in YebC-like proteins › Helical bundle domain in YebC-like proteins › Helical bundle domain in YebC-like proteins › TACO1_YebC_N | 0.92 | 61.0 | 7.40e-01 | 70.3% | 100.0% |
| 3171200 | 4003.1.1.1 ↗ | alpha arrays › Helical bundle domain in YebC-like proteins › Helical bundle domain in YebC-like proteins › Helical bundle domain in YebC-like proteins › TACO1_YebC_N | 0.83 | 56.0 | 6.32e-01 | 71.2% | 89.4% |
| 4971089 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.67 | 46.0 | 4.08e-01 | 71.2% | 72.7% |
| 4541653 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.62 | 47.0 | 5.08e-01 | 99.1% | 93.7% |
| 3883588 | 604.1.1.125 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SYNRG_C | 0.62 | 43.0 | 3.65e-01 | 70.3% | 56.7% |
| 3461433 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.61 | 55.0 | 4.42e-01 | 100.0% | 92.7% |
| 3625874 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.57 | 41.0 | 3.83e-01 | 99.1% | 60.7% |
| 4018370 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.55 | 45.0 | 4.28e-01 | 95.5% | 73.1% |
| 4093318 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.55 | 28.0 | 2.99e-01 | 73.0% | 54.7% |
| 3506223 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.54 | 38.0 | 3.30e-01 | 72.1% | 78.2% |
| 3515689 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.52 | 45.0 | 3.74e-01 | 94.6% | 98.5% |
| 5037362 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.52 | 42.0 | 3.55e-01 | 86.5% | 63.3% |
| 3224861 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.51 | 45.0 | 4.29e-01 | 97.3% | 98.5% |