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IMGVR_UViG_3300019239_000403-3300019239-Ga0180030_10973662
Arc-VirIMGVR_UViG_3300019239_000403-3300019239-Ga0180030_10973662
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-41_81-109_178-331
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18320.7 best | Csc2 | 57.9 | 1.40e-15 | 64.7% | 31.9% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qsdA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.64 | 22.0 | 3.94e-01 | 80.8% | 100.0% |
| 1egjA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 23.0 | 3.34e-01 | 84.8% | 75.2% |
| 3ln6A01 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.55 | 43.0 | 3.53e-01 | 81.7% | 93.1% |
| 7q61A01 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 23.0 | 3.07e-01 | 84.8% | 77.1% |
| 1l9nA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 22.0 | 2.99e-01 | 83.9% | 74.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2860270 | 304.139.1.5 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › Csc2 | 0.78 | 73.0 | 6.37e-01 | 97.8% | 100.0% |
| 5009933 | 304.139.1.5 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › Csc2 | 0.76 | 71.0 | 6.05e-01 | 97.8% | 98.2% |
| 5048219 | 304.139.1.5 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › Csc2 | 0.76 | 71.0 | 6.40e-01 | 97.8% | 99.3% |
| 1347552 | 304.139.1.5 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › Csc2 | 0.70 | 66.0 | 5.66e-01 | 98.7% | 97.6% |
| 5074269 | 821.1.1.4 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF123 | 0.59 | 39.0 | 4.77e-01 | 79.9% | 100.0% |