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IMGVR_UViG_3300019239_000403-3300019239-Ga0180030_10973663
Arc-VirIMGVR_UViG_3300019239_000403-3300019239-Ga0180030_10973663
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-176
Domain cluster:
rep: ACSJ01000019.1__EES90262.1__CLG_B2197__00003__D2-153
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26241.1 best | Cas_Csc1 | 58.5 | 9.70e-16 | 94.9% | 60.1% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vzhA00 | 3.30.70.2660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 48.0 | 4.65e-01 | 100.0% | 68.6% |
| 5h9fJ00 | 3.30.70.2660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 50.0 | 4.61e-01 | 98.9% | 72.6% |
| 1tdqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 27.0 | 3.61e-01 | 83.5% | 88.9% |
| 4iihB04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 28.0 | 3.47e-01 | 81.2% | 79.4% |
| 2w5fB01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 29.0 | 3.16e-01 | 75.6% | 61.8% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.52 | 29.0 | 3.45e-01 | 100.0% | 78.7% |
| 2qjvA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 21.0 | 2.60e-01 | 98.3% | 55.8% |
| 3abgB03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.51 | 28.0 | 2.77e-01 | 97.7% | 49.5% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077675 | 304.158.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs | 0.74 | 51.0 | 4.82e-01 | 98.3% | 60.3% |
| 4952413 | 304.158.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs | 0.73 | 45.0 | 4.44e-01 | 98.3% | 58.4% |
| 5013690 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.70 | 49.0 | 4.63e-01 | 97.2% | 60.0% |
| 5021424 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.68 | 52.0 | 4.72e-01 | 98.3% | 60.4% |
| 4989910 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.66 | 53.0 | 4.85e-01 | 98.3% | 65.8% |
| 3322866 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.64 | 31.0 | 3.77e-01 | 99.4% | 68.7% |
| 5071665 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.64 | 53.0 | 4.68e-01 | 98.3% | 61.6% |
| 4996327 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.64 | 53.0 | 4.78e-01 | 99.4% | 64.4% |
| 4967166 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.63 | 57.0 | 5.07e-01 | 98.3% | 69.6% |
| 4969503 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.63 | 58.0 | 5.53e-01 | 97.2% | 94.0% |
| 5071062 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.62 | 59.0 | 4.75e-01 | 100.0% | 98.4% |
| 5005979 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.62 | 59.0 | 4.60e-01 | 100.0% | 97.7% |
| 4969690 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.62 | 59.0 | 5.31e-01 | 100.0% | 82.6% |
| 5066096 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.62 | 59.0 | 5.42e-01 | 100.0% | 88.2% |
| 4944714 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.61 | 58.0 | 4.82e-01 | 100.0% | 93.8% |
| 5004209 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.61 | 58.0 | 4.81e-01 | 100.0% | 71.0% |
| 2388895 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.61 | 50.0 | 4.43e-01 | 97.7% | 61.5% |
| 3602190 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.61 | 51.0 | 4.57e-01 | 100.0% | 63.7% |
| 5066049 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.61 | 57.0 | 5.13e-01 | 100.0% | 86.3% |
| 4042790 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.61 | 58.0 | 4.71e-01 | 99.4% | 98.7% |
| 4955148 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.61 | 56.0 | 5.09e-01 | 99.4% | 74.3% |
| 5078902 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.61 | 58.0 | 4.92e-01 | 100.0% | 80.4% |
| 5077966 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.61 | 58.0 | 5.05e-01 | 100.0% | 90.4% |
| 4311415 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.60 | 55.0 | 4.68e-01 | 99.4% | 61.8% |
| 4989899 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.60 | 57.0 | 4.69e-01 | 100.0% | 88.8% |
| 4200050 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.60 | 53.0 | 4.62e-01 | 99.4% | 63.9% |
| 4888606 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.60 | 56.0 | 4.72e-01 | 98.3% | 98.2% |
| 5009917 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.60 | 56.0 | 4.39e-01 | 98.9% | 84.9% |
| 2984017 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.60 | 57.0 | 4.79e-01 | 100.0% | 78.5% |
| 2428749 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.60 | 56.0 | 4.71e-01 | 100.0% | 81.9% |
| 5017739 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.60 | 56.0 | 4.95e-01 | 100.0% | 70.8% |
| 2860270 | 304.139.1.5 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › Csc2 | 0.59 | 56.0 | 4.51e-01 | 100.0% | 62.8% |
| 3980749 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.59 | 51.0 | 4.59e-01 | 100.0% | 67.1% |
| 3110346 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.59 | 55.0 | 4.36e-01 | 97.7% | 86.4% |
| 2883189 | 929.1.1.0 ↗ | beta duplicates or obligate multimers › Resistin › Resistin › Resistin | 0.59 | 28.0 | 3.83e-01 | 78.4% | 93.7% |
| 4989896 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.59 | 55.0 | 4.43e-01 | 100.0% | 100.0% |
| 4989909 | 304.139.1.1 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › DevR | 0.58 | 54.0 | 4.39e-01 | 100.0% | 75.4% |
| 1144774 | 304.51.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › RAMPs | 0.58 | 49.0 | 4.76e-01 | 100.0% | 78.8% |
| 5077287 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.58 | 55.0 | 4.75e-01 | 100.0% | 73.3% |
| 1488213 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.58 | 49.0 | 4.60e-01 | 100.0% | 72.6% |
| 4967168 | 304.139.1.1 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › DevR | 0.58 | 54.0 | 4.38e-01 | 100.0% | 71.9% |
| 5022762 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.58 | 54.0 | 4.74e-01 | 100.0% | 84.3% |
| 5065554 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.57 | 54.0 | 4.16e-01 | 100.0% | 62.5% |
| 4971609 | 304.139.1.1 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › DevR | 0.57 | 53.0 | 4.16e-01 | 100.0% | 78.6% |
| 4946610 | 304.139.1.0 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related | 0.57 | 51.0 | 5.25e-01 | 97.2% | 100.0% |
| 5078345 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.55 | 52.0 | 4.91e-01 | 100.0% | 84.8% |
| 5023972 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 28.0 | 3.81e-01 | 78.4% | 97.6% |
| 5005974 | 304.51.1.6 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cmr3 | 0.55 | 50.0 | 4.54e-01 | 96.6% | 90.6% |
| 2984014 | 304.51.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › RAMPs | 0.55 | 50.0 | 4.83e-01 | 97.7% | 85.6% |
| 5077521 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.54 | 50.0 | 4.66e-01 | 98.3% | 84.7% |
| 4989281 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 28.0 | 3.62e-01 | 84.7% | 90.5% |
| 5046269 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 33.0 | 3.36e-01 | 80.7% | 61.1% |
| 4593672 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.52 | 29.0 | 3.11e-01 | 75.6% | 60.6% |
| 1030916 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.51 | 21.0 | 2.60e-01 | 77.3% | 57.7% |
| 3746715 | 11.1.1.360 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HYDIN_VesB_CFA65-like_Ig | 0.50 | 25.0 | 3.13e-01 | 98.9% | 76.2% |
| 3500825 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.50 | 25.0 | 3.32e-01 | 87.5% | 88.9% |
D2
medium
residues 177-242
Domain cluster:
representative
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5x68A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 51.0 | 3.24e-01 | 93.9% | 78.2% |
| 4gx0B03 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.59 | 48.0 | 4.57e-01 | 90.9% | 93.6% |
| 7uvpA02 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.59 | 45.0 | 4.51e-01 | 87.9% | 95.7% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 40.0 | 3.24e-01 | 74.2% | 42.1% |
| 1neeA01 | 3.30.70.3150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 45.0 | 4.17e-01 | 90.9% | 69.2% |
| 2cdqA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 46.0 | 4.36e-01 | 93.9% | 84.5% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.57 | 32.0 | 3.37e-01 | 95.5% | 57.9% |
| 2gqfA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 48.0 | 3.36e-01 | 100.0% | 84.7% |
| 7b3aA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 35.0 | 2.71e-01 | 87.9% | 26.2% |
| 2dy1A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.57 | 43.0 | 4.20e-01 | 86.4% | 85.5% |
| 2qsrA01 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.57 | 46.0 | 3.71e-01 | 100.0% | 80.6% |
| 1mw7A03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.56 | 43.0 | 4.24e-01 | 89.4% | 81.3% |
| 1dctA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 39.0 | 2.95e-01 | 74.2% | 60.7% |
| 2lpuA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.56 | 43.0 | 3.45e-01 | 87.9% | 90.5% |
| 1x4dA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 46.0 | 4.08e-01 | 97.0% | 62.7% |
| 1r6vA02 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.55 | 44.0 | 4.23e-01 | 95.5% | 78.2% |
| 3l4gB03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.55 | 43.0 | 4.20e-01 | 87.9% | 89.2% |
| 3e3xA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.55 | 43.0 | 3.76e-01 | 92.4% | 91.2% |
| 2dt9A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 44.0 | 4.26e-01 | 89.4% | 82.4% |
| 3pg1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 39.0 | 3.30e-01 | 80.3% | 84.5% |
| 2p5vA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.54 | 42.0 | 3.97e-01 | 89.4% | 82.1% |
| 3keyA02 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.54 | 38.0 | 3.51e-01 | 74.2% | 70.5% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 43.0 | 3.37e-01 | 90.9% | 61.4% |
| 5d8cA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.54 | 42.0 | 3.43e-01 | 92.4% | 45.2% |
| 3l4jA04 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.53 | 42.0 | 3.81e-01 | 93.9% | 74.5% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.53 | 41.0 | 3.96e-01 | 87.9% | 84.4% |
| 3d6kA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 43.0 | 3.05e-01 | 95.5% | 79.9% |
| 3mahA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 41.0 | 4.06e-01 | 87.9% | 92.8% |
| 1z4hA01 | 1.10.238.160 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.53 | 40.0 | 4.18e-01 | 92.4% | 94.8% |
| 3f0zA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.53 | 38.0 | 3.19e-01 | 77.3% | 67.8% |
| 3mcqA02 | 3.90.650.10 | Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain | 0.53 | 42.0 | 3.22e-01 | 89.4% | 82.1% |
| 2re1A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 42.0 | 4.06e-01 | 87.9% | 79.7% |
| 7k98E03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.52 | 41.0 | 4.07e-01 | 87.9% | 97.1% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.52 | 44.0 | 4.03e-01 | 100.0% | 74.7% |
| 2qb7B02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.52 | 42.0 | 3.52e-01 | 100.0% | 92.1% |
| 2ba0A03 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 41.0 | 3.90e-01 | 90.9% | 77.1% |
| 3tviA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.52 | 42.0 | 3.30e-01 | 95.5% | 89.9% |
| 4erdA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 40.0 | 3.53e-01 | 89.4% | 57.4% |
| 2bv6A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.40e-01 | 93.9% | 66.9% |
| 3c3pA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 37.0 | 2.74e-01 | 77.3% | 58.1% |
| 1fvqA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 39.0 | 3.89e-01 | 87.9% | 90.3% |
| 1r8eA02 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.51 | 40.0 | 3.95e-01 | 93.9% | 80.8% |
| 1t94B02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.51 | 39.0 | 3.34e-01 | 87.9% | 96.6% |
| 3zcoA00 | 1.10.10.2450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 39.0 | 3.34e-01 | 90.9% | 77.2% |
| 4mz0B05 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.51 | 37.0 | 3.74e-01 | 92.4% | 82.1% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 38.0 | 3.75e-01 | 84.8% | 88.6% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3285283 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.63 | 48.0 | 3.68e-01 | 93.9% | 34.5% |
| 4968723 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 46.0 | 3.81e-01 | 80.3% | 47.5% |
| 4667962 | 304.37.1.0 ↗ | a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 | 0.61 | 48.0 | 4.47e-01 | 89.4% | 81.2% |
| 5000814 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 41.0 | 4.14e-01 | 72.7% | 76.9% |
| 3505715 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.59 | 44.0 | 4.25e-01 | 86.4% | 81.2% |
| 5041741 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 45.0 | 4.38e-01 | 89.4% | 73.3% |
| 3601388 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.58 | 45.0 | 4.40e-01 | 87.9% | 88.0% |
| 2987712 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.58 | 45.0 | 4.32e-01 | 87.9% | 84.8% |
| 3967495 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.58 | 45.0 | 4.35e-01 | 87.9% | 78.7% |
| 3216595 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.57 | 45.0 | 4.17e-01 | 90.9% | 70.0% |
| 5064533 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 39.0 | 3.91e-01 | 71.2% | 77.1% |
| 4023303 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.57 | 46.0 | 4.06e-01 | 93.9% | 65.7% |
| 2583 | 101.1.2.231 ↗ | alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot | 0.57 | 41.0 | 3.56e-01 | 80.3% | 54.8% |
| 3617310 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.56 | 44.0 | 4.29e-01 | 87.9% | 89.3% |
| 3587825 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 46.0 | 4.44e-01 | 90.9% | 82.7% |
| 4455319 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.56 | 43.0 | 4.09e-01 | 87.9% | 82.5% |
| 3972982 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.56 | 47.0 | 3.30e-01 | 100.0% | 86.1% |
| 4373306 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.56 | 45.0 | 4.36e-01 | 90.9% | 94.7% |
| 4340473 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.56 | 42.0 | 3.96e-01 | 86.4% | 76.5% |
| 3839289 | 304.54.1.0 ↗ | a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like | 0.56 | 45.0 | 4.26e-01 | 92.4% | 78.8% |
| 5018146 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.56 | 43.0 | 2.98e-01 | 86.4% | 26.3% |
| 3289257 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.55 | 44.0 | 4.09e-01 | 89.4% | 75.3% |
| 4229550 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.55 | 44.0 | 4.12e-01 | 90.9% | 83.5% |
| 3390067 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.55 | 44.0 | 4.05e-01 | 87.9% | 71.8% |
| 4668511 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.55 | 45.0 | 4.23e-01 | 93.9% | 84.7% |
| 3891991 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.55 | 42.0 | 4.23e-01 | 90.9% | 92.9% |
| 3730774 | 304.9.1.108 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_fung | 0.55 | 45.0 | 4.12e-01 | 97.0% | 70.0% |
| 3486001 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.54 | 42.0 | 4.08e-01 | 89.4% | 86.7% |
| 3730084 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.54 | 43.0 | 4.17e-01 | 89.4% | 85.3% |
| 5060154 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.54 | 45.0 | 4.42e-01 | 93.9% | 100.0% |
| 5053492 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.54 | 43.0 | 3.94e-01 | 89.4% | 67.8% |
| 1190547 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 42.0 | 3.86e-01 | 87.9% | 71.1% |
| 4462625 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.54 | 42.0 | 4.02e-01 | 89.4% | 80.0% |
| 3958992 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.54 | 40.0 | 3.88e-01 | 86.4% | 81.2% |
| 5010511 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 42.0 | 4.24e-01 | 92.4% | 100.0% |
| 4033708 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.53 | 44.0 | 4.00e-01 | 93.9% | 80.0% |
| 3204572 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.53 | 42.0 | 3.86e-01 | 93.9% | 73.7% |
| 5031157 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.53 | 42.0 | 4.30e-01 | 89.4% | 93.8% |
| 1834379 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.53 | 43.0 | 4.36e-01 | 100.0% | 95.5% |
| 5003804 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.52 | 42.0 | 3.94e-01 | 95.5% | 84.4% |
| 4934080 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 41.0 | 3.33e-01 | 93.9% | 89.3% |
| 3521725 | 327.11.2.55 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF26774 | 0.52 | 41.0 | 3.86e-01 | 90.9% | 85.9% |
| 3471767 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.52 | 42.0 | 3.75e-01 | 89.4% | 64.2% |
| 3286117 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.52 | 39.0 | 3.28e-01 | 93.9% | 44.8% |
| 4676848 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.52 | 39.0 | 3.86e-01 | 89.4% | 89.3% |
| 3741625 | 304.9.1.38 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SET_assoc | 0.52 | 40.0 | 3.43e-01 | 86.4% | 50.4% |
| 3482040 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.52 | 41.0 | 3.84e-01 | 95.5% | 70.6% |
| 3382880 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.51 | 40.0 | 3.94e-01 | 90.9% | 89.3% |
| 3529971 | 327.11.2.18 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › DTX3L_KH-like | 0.51 | 41.0 | 3.91e-01 | 93.9% | 91.3% |
| 4963691 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.51 | 42.0 | 3.87e-01 | 93.9% | 72.2% |
| 4031948 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.51 | 36.0 | 3.10e-01 | 75.8% | 47.8% |
| 4971846 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.51 | 40.0 | 2.64e-01 | 93.9% | 57.5% |
| 3669520 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.51 | 39.0 | 3.56e-01 | 89.4% | 73.0% |
| 4933747 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.51 | 40.0 | 3.76e-01 | 90.9% | 77.6% |
| 5069627 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.51 | 40.0 | 3.65e-01 | 90.9% | 68.4% |
| 4137642 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.50 | 39.0 | 4.00e-01 | 90.9% | 96.7% |
| 3932148 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.50 | 42.0 | 3.90e-01 | 93.9% | 88.2% |
| 5036199 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.50 | 39.0 | 3.83e-01 | 92.4% | 97.3% |
| 3202787 | 327.11.2.38 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_SLS1_1 | 0.50 | 39.0 | 3.88e-01 | 92.4% | 94.3% |