←Back to structures
IMGVR_UViG_3300019259_000386-3300019259-Ga0184646_12204881
Arc-VirIMGVR_UViG_3300019259_000386-3300019259-Ga0184646_12204881
Identity
- Kingdom:
- archaea
Quality
94.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 114-284
Domain cluster:
rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00555__D66-224
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00834.26 best | Ribul_P_3_epim | 164.4 | 3.20e-48 | 100.0% | 84.9% |
CATH (89)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ctlA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.96 | 92.0 | 8.29e-01 | 100.0% | 77.2% |
| 2fliC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.95 | 91.0 | 8.20e-01 | 100.0% | 76.7% |
| 3inpA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.95 | 91.0 | 8.17e-01 | 100.0% | 76.6% |
| 1tqxA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.93 | 89.0 | 8.01e-01 | 100.0% | 76.5% |
| 4fb7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.86 | 76.0 | 6.37e-01 | 100.0% | 58.6% |
| 3cu2A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.86 | 83.0 | 7.29e-01 | 100.0% | 75.6% |
| 1jcmP00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.84 | 73.0 | 6.26e-01 | 100.0% | 59.8% |
| 6bmaA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.84 | 74.0 | 6.29e-01 | 100.0% | 60.2% |
| 3tsmA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.84 | 74.0 | 6.26e-01 | 100.0% | 59.8% |
| 1i4nA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.84 | 73.0 | 6.31e-01 | 100.0% | 62.2% |
| 1dl3B00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.83 | 68.0 | 6.53e-01 | 100.0% | 75.3% |
| 3b5vA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.83 | 74.0 | 6.40e-01 | 100.0% | 64.4% |
| 1q6oB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.83 | 75.0 | 6.86e-01 | 100.0% | 75.3% |
| 1piiA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.81 | 69.0 | 6.67e-01 | 100.0% | 80.6% |
| 1v5xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.80 | 70.0 | 6.62e-01 | 100.0% | 78.0% |
| 4aajA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.78 | 67.0 | 6.30e-01 | 100.0% | 77.0% |
| 1geqB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.77 | 73.0 | 6.38e-01 | 100.0% | 76.7% |
| 4gj1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.77 | 71.0 | 6.35e-01 | 100.0% | 72.5% |
| 2czdB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.77 | 69.0 | 6.40e-01 | 100.0% | 77.8% |
| 1nvmA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.76 | 72.0 | 6.07e-01 | 100.0% | 68.1% |
| 1l6wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.76 | 70.0 | 6.38e-01 | 100.0% | 75.5% |
| 1ccwB01 | 3.20.20.240 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Methylmalonyl-CoA mutase | 0.76 | 71.0 | 5.26e-01 | 100.0% | 60.4% |
| 5uckB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 71.0 | 5.84e-01 | 100.0% | 67.6% |
| 1gvfB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 70.0 | 5.89e-01 | 100.0% | 66.9% |
| 1twdA00 | 3.20.20.380 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Copper homeostasis (CutC) domain | 0.74 | 70.0 | 6.22e-01 | 100.0% | 75.6% |
| 2wqpA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 69.0 | 5.87e-01 | 100.0% | 69.4% |
| 6ofuA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 70.0 | 5.99e-01 | 100.0% | 66.0% |
| 1nf7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 70.0 | 5.00e-01 | 100.0% | 59.5% |
| 2nqlA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.74 | 67.0 | 6.09e-01 | 100.0% | 74.1% |
| 1rqeA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 69.0 | 5.76e-01 | 100.0% | 67.6% |
| 2ekcB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 69.0 | 5.93e-01 | 100.0% | 73.2% |
| 1zfjA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.73 | 69.0 | 4.89e-01 | 100.0% | 63.2% |
| 2zadA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.73 | 66.0 | 5.94e-01 | 100.0% | 71.3% |
| 3tw6B03 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.73 | 68.0 | 4.73e-01 | 100.0% | 37.2% |
| 1wx0A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.73 | 68.0 | 6.34e-01 | 100.0% | 82.0% |
| 1gehA02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.73 | 68.0 | 5.56e-01 | 100.0% | 80.1% |
| 2qhaA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.72 | 68.0 | 5.32e-01 | 100.0% | 72.0% |
| 1a5aA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 68.0 | 5.85e-01 | 100.0% | 94.1% |
| 4mwaA00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.72 | 67.0 | 5.77e-01 | 100.0% | 72.3% |
| 3px5A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.72 | 65.0 | 5.72e-01 | 100.0% | 67.5% |
| 3thaB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 66.0 | 5.82e-01 | 100.0% | 75.5% |
| 7upvA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.72 | 66.0 | 4.92e-01 | 100.0% | 88.1% |
| 4bfaA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 66.0 | 5.85e-01 | 100.0% | 82.8% |
| 3qc0A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.71 | 67.0 | 5.62e-01 | 100.0% | 79.1% |
| 2a7rD00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 66.0 | 5.33e-01 | 100.0% | 55.2% |
| 2j6xH00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 66.0 | 5.15e-01 | 100.0% | 53.4% |
| 3bg3A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 65.0 | 5.25e-01 | 100.0% | 76.0% |
| 1h7nA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 65.0 | 5.14e-01 | 100.0% | 74.7% |
| 1x7fA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 66.0 | 5.91e-01 | 100.0% | 80.3% |
| 2jbmA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 55.0 | 5.88e-01 | 100.0% | 94.5% |
| 3r2gA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 63.0 | 5.06e-01 | 100.0% | 51.1% |
| 3gwqA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.70 | 65.0 | 5.82e-01 | 100.0% | 78.5% |
| 3zo9A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.70 | 65.0 | 4.88e-01 | 100.0% | 66.2% |
| 1bqgA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.69 | 64.0 | 5.52e-01 | 100.0% | 65.0% |
| 4d8lA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.69 | 64.0 | 5.29e-01 | 100.0% | 63.6% |
| 4jcmA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.69 | 64.0 | 4.85e-01 | 100.0% | 72.5% |
| 3cawA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.68 | 62.0 | 5.59e-01 | 100.0% | 72.9% |
| 1t7lA02 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.68 | 63.0 | 4.88e-01 | 100.0% | 69.0% |
| 1tkkA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.67 | 62.0 | 5.45e-01 | 100.0% | 69.3% |
| 6y1xB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 60.0 | 5.29e-01 | 96.5% | 93.9% |
| 3ddmA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.67 | 61.0 | 5.46e-01 | 100.0% | 71.0% |
| 4aeeA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.67 | 61.0 | 4.94e-01 | 100.0% | 65.1% |
| 1v77A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.66 | 60.0 | 5.71e-01 | 98.2% | 85.1% |
| 3e74A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.66 | 61.0 | 4.87e-01 | 100.0% | 59.3% |
| 3go2A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.65 | 60.0 | 5.11e-01 | 100.0% | 83.1% |
| 3ik4A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.65 | 60.0 | 5.31e-01 | 100.0% | 79.3% |
| 2p8bA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.64 | 59.0 | 5.33e-01 | 100.0% | 81.7% |
| 1dtnA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.64 | 59.0 | 5.35e-01 | 100.0% | 80.9% |
| 7plsA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 59.0 | 4.72e-01 | 100.0% | 64.0% |
| 4nicA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 41.0 | 4.76e-01 | 97.7% | 95.7% |
| 1s8nA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 40.0 | 4.49e-01 | 98.2% | 87.9% |
| 1a2oA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 43.0 | 4.77e-01 | 98.8% | 95.5% |
| 1yqeA02 | 3.40.50.10700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like | 0.59 | 34.0 | 4.38e-01 | 99.4% | 100.0% |
| 5dclA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 38.0 | 4.45e-01 | 98.2% | 95.7% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 45.0 | 4.25e-01 | 83.0% | 68.0% |
| 3kloA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 44.0 | 4.79e-01 | 82.5% | 97.2% |
| 6wb4B01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 50.0 | 4.13e-01 | 96.5% | 96.4% |
| 1gcuA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 41.0 | 4.47e-01 | 97.7% | 92.4% |
| 4ms4B02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 46.0 | 4.59e-01 | 97.7% | 88.9% |
| 5o8zB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 42.0 | 4.58e-01 | 81.9% | 98.6% |
| 1lsuA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 39.0 | 4.36e-01 | 95.3% | 96.3% |
| 3dmyA02 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.54 | 38.0 | 4.16e-01 | 98.8% | 88.6% |
| 1gcaA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 42.0 | 4.49e-01 | 97.1% | 96.6% |
| 1ivnA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.53 | 48.0 | 4.76e-01 | 98.2% | 97.8% |
| 2a3nA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.52 | 39.0 | 3.99e-01 | 100.0% | 80.2% |
| 4l6wB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.52 | 43.0 | 4.34e-01 | 98.2% | 86.8% |
| 3fxaA00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.51 | 38.0 | 3.75e-01 | 100.0% | 70.2% |
| 3brsA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 37.0 | 4.08e-01 | 97.1% | 95.5% |
| 3euaF01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.50 | 38.0 | 4.00e-01 | 100.0% | 86.5% |
ECOD (95)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929269 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 1.00 | 99.0 | 8.10e-01 | 100.0% | 63.3% |
| 3603766 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.96 | 92.0 | 8.01e-01 | 100.0% | 70.9% |
| 3943985 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.96 | 93.0 | 8.21e-01 | 100.0% | 73.8% |
| 3658880 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.96 | 94.0 | 7.61e-01 | 100.0% | 70.2% |
| 4005617 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.96 | 93.0 | 8.17e-01 | 100.0% | 73.5% |
| 3594853 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.95 | 91.0 | 7.63e-01 | 100.0% | 64.6% |
| 5027624 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.95 | 90.0 | 8.21e-01 | 100.0% | 78.1% |
| 4102059 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.94 | 92.0 | 8.04e-01 | 100.0% | 73.2% |
| 3513877 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.94 | 89.0 | 7.86e-01 | 100.0% | 72.2% |
| 4677393 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.94 | 91.0 | 8.03e-01 | 100.0% | 73.9% |
| 4941332 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.94 | 86.0 | 7.83e-01 | 100.0% | 75.3% |
| 3628928 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.93 | 89.0 | 7.89e-01 | 100.0% | 73.0% |
| 1126487 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.93 | 91.0 | 8.06e-01 | 100.0% | 75.7% |
| 5024626 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.93 | 87.0 | 8.03e-01 | 100.0% | 79.0% |
| 3980529 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.93 | 87.0 | 7.96e-01 | 100.0% | 78.6% |
| 4134169 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.92 | 84.0 | 7.68e-01 | 100.0% | 75.3% |
| 3975534 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.89 | 86.0 | 7.40e-01 | 100.0% | 70.4% |
| 340897 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.86 | 83.0 | 7.27e-01 | 100.0% | 75.4% |
| 4452864 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.86 | 78.0 | 6.40e-01 | 100.0% | 56.8% |
| 3431875 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.85 | 78.0 | 6.10e-01 | 100.0% | 49.7% |
| 4051019 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.85 | 75.0 | 6.40e-01 | 100.0% | 61.2% |
| 4327115 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.85 | 75.0 | 6.35e-01 | 100.0% | 60.0% |
| 4944022 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.85 | 76.0 | 6.98e-01 | 100.0% | 74.8% |
| 4248775 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.85 | 72.0 | 6.28e-01 | 100.0% | 62.0% |
| 3164095 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.84 | 75.0 | 6.31e-01 | 100.0% | 58.9% |
| 3966488 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.83 | 73.0 | 6.17e-01 | 100.0% | 58.1% |
| 4557448 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.83 | 75.0 | 6.38e-01 | 100.0% | 62.3% |
| 4158714 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.79 | 74.0 | 6.43e-01 | 100.0% | 68.2% |
| 4119026 | 2002.1.1.28 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI | 0.79 | 74.0 | 6.59e-01 | 100.0% | 73.5% |
| 4942875 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.78 | 75.0 | 6.66e-01 | 100.0% | 75.2% |
| 4523804 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.78 | 73.0 | 6.24e-01 | 100.0% | 72.1% |
| 4173776 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.78 | 70.0 | 6.44e-01 | 100.0% | 75.1% |
| 4059724 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.78 | 71.0 | 6.39e-01 | 100.0% | 73.2% |
| 4457810 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.78 | 73.0 | 6.14e-01 | 100.0% | 63.4% |
| 4372593 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.77 | 73.0 | 6.10e-01 | 100.0% | 70.2% |
| 5066261 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.77 | 72.0 | 6.27e-01 | 100.0% | 69.0% |
| 3643243 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.77 | 72.0 | 6.03e-01 | 100.0% | 68.9% |
| 4174222 | 2002.1.1.28 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI | 0.77 | 71.0 | 6.49e-01 | 100.0% | 76.4% |
| 3183572 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.77 | 72.0 | 5.93e-01 | 100.0% | 66.2% |
| 4016387 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.77 | 71.0 | 5.78e-01 | 100.0% | 61.9% |
| 3602729 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.76 | 72.0 | 6.00e-01 | 100.0% | 68.2% |
| None | — | 0.76 | 71.0 | 6.09e-01 | 100.0% | 73.1% | |
| 4384512 | 2002.1.1.97 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TMP-TENI | 0.76 | 67.0 | 6.29e-01 | 100.0% | 77.5% |
| 4928426 | 2002.1.1.236 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS | 0.76 | 52.0 | 5.67e-01 | 82.5% | 83.1% |
| 4211024 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.76 | 71.0 | 6.17e-01 | 100.0% | 74.7% |
| 4440430 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.76 | 71.0 | 6.05e-01 | 100.0% | 72.1% |
| 4972134 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.76 | 73.0 | 6.08e-01 | 100.0% | 67.0% |
| 4629816 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.76 | 71.0 | 5.86e-01 | 100.0% | 63.8% |
| 4947377 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.76 | 73.0 | 6.12e-01 | 100.0% | 68.7% |
| 3198155 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.76 | 63.0 | 6.11e-01 | 87.7% | 81.1% |
| 4056099 | 2002.1.1.28 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI | 0.76 | 70.0 | 6.38e-01 | 100.0% | 77.1% |
| None | — | 0.76 | 71.0 | 5.99e-01 | 100.0% | 70.4% | |
| None | — | 0.76 | 70.0 | 6.23e-01 | 100.0% | 78.8% | |
| 4589032 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.75 | 71.0 | 5.85e-01 | 100.0% | 72.6% |
| 4081021 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.75 | 70.0 | 5.97e-01 | 100.0% | 74.3% |
| 5035349 | 2002.1.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RuBisCO_large | 0.75 | 70.0 | 5.66e-01 | 100.0% | 76.8% |
| 4318438 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.75 | 70.0 | 5.89e-01 | 100.0% | 69.5% |
| 195327 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.75 | 67.0 | 5.92e-01 | 100.0% | 67.6% |
| 2754032 | 2002.1.1.38 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TAL_FSA | 0.75 | 68.0 | 6.21e-01 | 100.0% | 74.9% |
| 4560567 | 2002.1.1.97 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TMP-TENI | 0.74 | 66.0 | 6.12e-01 | 100.0% | 76.2% |
| 3972136 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.74 | 69.0 | 6.01e-01 | 100.0% | 80.3% |
| 5065695 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.74 | 69.0 | 6.10e-01 | 100.0% | 90.2% |
| 3505834 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.74 | 70.0 | 4.76e-01 | 100.0% | 36.0% |
| 193501 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.74 | 66.0 | 5.84e-01 | 100.0% | 67.6% |
| 3432927 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.74 | 69.0 | 6.05e-01 | 100.0% | 70.4% |
| 5015360 | 2002.1.1.11 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PK | 0.74 | 70.0 | 6.13e-01 | 100.0% | 74.6% |
| 3680929 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.74 | 69.0 | 5.80e-01 | 100.0% | 62.6% |
| 143983 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.73 | 68.0 | 5.63e-01 | 100.0% | 65.3% |
| 5019986 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.72 | 67.0 | 5.83e-01 | 100.0% | 80.8% |
| 428368 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.72 | 66.0 | 5.82e-01 | 100.0% | 75.5% |
| 432902 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.71 | 67.0 | 5.83e-01 | 100.0% | 69.4% |
| 2658619 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.71 | 66.0 | 5.37e-01 | 100.0% | 80.6% |
| 5029895 | 2002.1.1.209 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF2090 | 0.71 | 65.0 | 5.39e-01 | 100.0% | 79.7% |
| 5017854 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.69 | 64.0 | 5.08e-01 | 100.0% | 59.4% |
| 4975106 | 2002.1.1.236 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS | 0.69 | 61.0 | 5.99e-01 | 100.0% | 87.8% |
| 4992624 | 2002.1.1.236 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS | 0.68 | 61.0 | 6.05e-01 | 100.0% | 89.4% |
| 5065160 | 2002.1.1.236 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS | 0.68 | 59.0 | 5.94e-01 | 100.0% | 90.3% |
| 5051987 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 62.0 | 4.99e-01 | 99.4% | 70.2% |
| 4962245 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.67 | 62.0 | 5.64e-01 | 100.0% | 76.0% |
| 3268641 | 2002.1.1.189 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRMT5_TIM | 0.67 | 62.0 | 5.10e-01 | 100.0% | 90.5% |
| 4995173 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.66 | 59.0 | 4.87e-01 | 97.7% | 85.4% |
| 5051687 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.65 | 59.0 | 4.76e-01 | 100.0% | 76.1% |
| 4062218 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.65 | 59.0 | 5.22e-01 | 100.0% | 88.5% |
| 4961009 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.65 | 59.0 | 5.21e-01 | 100.0% | 94.4% |
| 5032526 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.65 | 59.0 | 4.72e-01 | 98.2% | 98.2% |
| 4972567 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.65 | 59.0 | 4.66e-01 | 100.0% | 94.4% |
| 370315 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.64 | 59.0 | 5.31e-01 | 100.0% | 80.6% |
| 4984856 | 2002.1.1.232 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 | 0.63 | 57.0 | 5.09e-01 | 100.0% | 91.1% |
| 4955570 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.63 | 58.0 | 5.07e-01 | 100.0% | 90.4% |
| 4972142 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.62 | 57.0 | 5.22e-01 | 100.0% | 96.0% |
| 4380442 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.60 | 42.0 | 4.76e-01 | 98.8% | 93.8% |
| 5066470 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.58 | 53.0 | 4.44e-01 | 100.0% | 82.7% |
| 1738174 | 7512.1.1.21 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › MGDG_synth | 0.56 | 43.0 | 4.64e-01 | 99.4% | 97.8% |
| 2723920 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.56 | 50.0 | 4.13e-01 | 96.5% | 96.1% |
| 2774886 | 2007.1.3.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › OKR_DC_1_N | 0.56 | 40.0 | 4.39e-01 | 99.4% | 91.9% |
D2
medium
residues 1-73
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00456.27 best | Transketolase_N | 44.0 | 2.10e-11 | 97.3% | 19.5% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l84A01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.88 | 82.0 | 5.18e-01 | 100.0% | 24.0% |
| 3ooyA01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.87 | 82.0 | 5.28e-01 | 100.0% | 25.7% |
| 2pgnA03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.70 | 53.0 | 3.77e-01 | 97.3% | 27.1% |
| 3eytB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.62 | 46.0 | 3.67e-01 | 80.8% | 63.0% |
| 1adjB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.59 | 37.0 | 3.43e-01 | 78.1% | 48.9% |
| 3llcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 45.0 | 3.20e-01 | 89.0% | 67.0% |
| 3fj1A02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.57 | 42.0 | 3.49e-01 | 79.5% | 86.8% |
| 3rc3A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 45.0 | 3.65e-01 | 90.4% | 79.3% |
| 1httA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.55 | 38.0 | 3.47e-01 | 83.6% | 53.1% |
| 7tbvB02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 46.0 | 3.22e-01 | 93.2% | 85.0% |
| 2carB00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.55 | 41.0 | 3.15e-01 | 83.6% | 84.0% |
| 4q48A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 44.0 | 3.35e-01 | 94.5% | 81.5% |
| 3t7iA02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.54 | 42.0 | 3.65e-01 | 86.3% | 85.1% |
| 3vs8H00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.53 | 43.0 | 2.84e-01 | 97.3% | 68.8% |
| 7va8A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 43.0 | 3.05e-01 | 95.9% | 54.2% |
| 3lfjB00 | 3.40.35.10 | Alpha Beta › 3-Layer(aba) Sandwich › Fructose Permease › Phosphotransferase system, sorbose subfamily IIB component | 0.52 | 42.0 | 3.39e-01 | 95.9% | 86.7% |
| 1y44A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 41.0 | 2.88e-01 | 90.4% | 47.0% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4940981 | 7574.1.1.1 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N | 0.95 | 91.0 | 5.74e-01 | 100.0% | 24.0% |
| 5068155 | 7574.1.1.1 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N | 0.95 | 90.0 | 5.73e-01 | 100.0% | 24.7% |
| 5013517 | 7574.1.1.1 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N | 0.92 | 64.0 | 4.34e-01 | 84.9% | 23.7% |
| 3475170 | 7574.1.1.1 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N | 0.91 | 86.0 | 6.34e-01 | 100.0% | 46.7% |
| None | — | 0.91 | 82.0 | 5.16e-01 | 100.0% | 21.2% | |
| 5011975 | 7574.1.1.1 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N | 0.90 | 81.0 | 5.31e-01 | 100.0% | 25.9% |
| 4942416 | 7574.1.1.1 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N | 0.89 | 83.0 | 5.56e-01 | 100.0% | 30.2% |
| 4990563 | 7574.1.1.1 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N | 0.89 | 84.0 | 5.54e-01 | 100.0% | 29.2% |
| 4109122 | 7574.1.1.27 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N, Transket_pyr | 0.88 | 82.0 | 4.77e-01 | 100.0% | 13.9% |
| 3948368 | 7574.1.1.1 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N | 0.87 | 81.0 | 5.29e-01 | 100.0% | 26.4% |
| 5043486 | 205.1.1.1 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 | 0.77 | 63.0 | 5.01e-01 | 87.7% | 51.4% |
| 9797 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.66 | 50.0 | 3.86e-01 | 82.2% | 75.9% |
| 3188220 | 2004.1.1.88 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW | 0.65 | 53.0 | 3.68e-01 | 91.8% | 70.4% |
| 4983432 | 2006.1.2.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases | 0.62 | 44.0 | 3.25e-01 | 74.0% | 82.6% |
| 3727331 | 2003.1.1.69 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 | 0.58 | 49.0 | 3.39e-01 | 95.9% | 84.6% |
| 4215086 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 42.0 | 3.58e-01 | 80.8% | 80.0% |
| 3665654 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.56 | 38.0 | 3.18e-01 | 71.2% | 37.9% |
| 5033383 | 2007.1.7.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH_2 | 0.56 | 42.0 | 3.27e-01 | 80.8% | 91.9% |
| 3657932 | 2007.1.4.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › DAGK_cat | 0.56 | 42.0 | 3.83e-01 | 83.6% | 90.5% |
| 3995362 | 2004.1.1.499 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2, Helicase_C_2 | 0.56 | 42.0 | 2.67e-01 | 83.6% | 62.1% |
| 5078389 | 3930.1.1.17 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › Helicase_C | 0.55 | 46.0 | 3.28e-01 | 95.9% | 53.6% |
| 3324896 | 2004.1.1.88 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW | 0.54 | 46.0 | 3.26e-01 | 98.6% | 53.5% |
| 1253199 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.53 | 43.0 | 3.55e-01 | 89.0% | 83.5% |
| 4586541 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.53 | 37.0 | 3.38e-01 | 89.0% | 53.0% |
| 3717589 | 7516.1.1.65 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Fucokinase | 0.52 | 38.0 | 2.66e-01 | 78.1% | 75.4% |
| 4350189 | 247.1.1.29 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.51 | 41.0 | 2.76e-01 | 90.4% | 39.1% |
| 4073916 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.50 | 38.0 | 3.12e-01 | 84.9% | 87.8% |
D3
medium
residues 74-113_285-350
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cf6E03 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.58 | 45.0 | 4.25e-01 | 99.1% | 67.9% |
| 2p58C00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 36.0 | 3.56e-01 | 96.2% | 58.9% |
| 4l3uA00 | 1.20.1480.40 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 | 0.54 | 36.0 | 3.50e-01 | 98.1% | 59.3% |
| 2ebfX02 | 1.20.140.180 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.52 | 37.0 | 3.39e-01 | 91.5% | 54.5% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929269 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.94 | 77.0 | 5.45e-01 | 84.0% | 96.3% |
| 4022979 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 48.0 | 3.69e-01 | 100.0% | 84.5% |
| 3892495 | 604.1.1.7 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_plectin_7 | 0.51 | 37.0 | 3.64e-01 | 76.4% | 98.3% |