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IMGVR_UViG_3300019272_001172-3300019272-Ga0182059_11022011
Arc-VirIMGVR_UViG_3300019272_001172-3300019272-Ga0182059_11022011
Identity
- Kingdom:
- archaea
Quality
80.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-40
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i1sB00 | 4.10.80.340 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › | 0.63 | 44.0 | 4.19e-01 | 85.0% | 61.5% |
| 3o2iA00 | 3.30.70.2710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 51.0 | 4.02e-01 | 97.5% | 63.4% |
| 3ks7A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 43.0 | 2.86e-01 | 82.5% | 64.2% |
| 4dgwC00 | 2.60.40.2690 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 42.0 | 2.99e-01 | 85.0% | 41.1% |
| 1j2vA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 39.0 | 3.06e-01 | 82.5% | 69.3% |
| 4n01A01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.54 | 46.0 | 3.35e-01 | 100.0% | 40.2% |
| 2ecfA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.54 | 42.0 | 2.50e-01 | 100.0% | 13.9% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.53 | 38.0 | 3.23e-01 | 97.5% | 42.9% |
| 4ivkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.50 | 36.0 | 2.18e-01 | 82.5% | 51.7% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.50 | 37.0 | 2.70e-01 | 87.5% | 60.4% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4238837 | 376.1.2.6 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › PET | 0.64 | 45.0 | 3.98e-01 | 80.0% | 55.2% |
| 3676802 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 47.0 | 2.63e-01 | 82.5% | 13.7% |
| 4778874 | 3423.1.1.3 ↗ | a+b three layers › Nonstructural protein V › Nonstructural protein V › Nonstructural protein V › zf-Paramyx-P | 0.63 | 44.0 | 4.19e-01 | 85.0% | 61.5% |
| 1387073 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.63 | 47.0 | 3.81e-01 | 90.0% | 83.5% |
| 3271786 | 193.1.1.0 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like | 0.61 | 43.0 | 2.84e-01 | 75.0% | 57.6% |
| 3215682 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.58 | 39.0 | 2.78e-01 | 70.0% | 44.6% |
| 3472076 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.57 | 39.0 | 2.82e-01 | 72.5% | 77.0% |
| 3994295 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 42.0 | 2.52e-01 | 92.5% | 37.2% |
| 4945700 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 43.0 | 2.97e-01 | 90.0% | 38.0% |
| 5049092 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.55 | 41.0 | 2.53e-01 | 95.0% | 23.9% |
| 4044734 | 6076.1.1.1 ↗ | alpha arrays › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme › UBA_E1_SCCH | 0.54 | 37.0 | 2.53e-01 | 95.0% | 19.3% |
| 3890507 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.54 | 40.0 | 2.71e-01 | 100.0% | 94.8% |
| 3669809 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.54 | 38.0 | 2.81e-01 | 80.0% | 74.4% |
| 3698880 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.53 | 36.0 | 2.17e-01 | 97.5% | 9.5% |
| 4993775 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.51 | 34.0 | 3.17e-01 | 90.0% | 49.1% |
| 3507995 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.51 | 39.0 | 2.63e-01 | 100.0% | 91.6% |
| 4848452 | 135.1.1.1 ↗ | alpha arrays › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › G-alpha | 0.50 | 44.0 | 4.16e-01 | 100.0% | 91.8% |
| 4798770 | 5097.1.1.3 ↗ | beta sandwiches › Middle beta-sandwich domain in anthrax protective antigen › Middle beta-sandwich domain in anthrax protective antigen › Middle beta-sandwich domain in anthrax protective antigen › Binary_toxB_2, Binary_toxB_3 | 0.50 | 41.0 | 2.70e-01 | 97.5% | 20.7% |
| 3652752 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.50 | 40.0 | 2.58e-01 | 100.0% | 92.8% |