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IMGVR_UViG_3300019375_000023-3300019375-Ga0187898_100049125

Arc-Vir

IMGVR_UViG_3300019375_000023-3300019375-Ga0187898_100049125

Quality

77.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-75
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w5qA01 3.30.1120.170 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.78 42.0 3.60e-01 71.7% 34.4%
3u37A02 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.76 42.0 2.70e-01 70.0% 12.9%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3257678 5000.4.1.0 alpha arrays › Toxins' membrane translocation domains › delta-Endotoxin (insectocide), N-terminal domain › delta-Endotoxin (insectocide), N-terminal domain 0.93 70.0 4.35e-01 78.3% 17.5%
3691414 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.89 64.0 5.08e-01 75.0% 52.7%
3625271 5069.1.3.79 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › 7TM_GPCR_Srx 0.89 64.0 4.93e-01 75.0% 37.5%
3274487 605.1.1.155 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Gpi1 0.80 57.0 4.03e-01 75.0% 28.6%
3723257 5042.1.1.0 extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region 0.77 64.0 5.71e-01 96.7% 64.7%
4026266 4106.1.1.1 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.72 64.0 4.15e-01 98.3% 39.6%