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IMGVR_UViG_3300019375_000023-3300019375-Ga0187898_10004918

Arc-Vir

IMGVR_UViG_3300019375_000023-3300019375-Ga0187898_10004918

Identity

Kingdom:
archaea

Quality

70.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 56-136
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 40.0 4.22e-01 100.0% 80.0%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.58 50.0 4.67e-01 100.0% 90.6%
2jozA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 45.0 4.28e-01 91.4% 70.8%
2gtlN02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.56 48.0 3.92e-01 100.0% 70.0%
2lfuA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.56 50.0 4.30e-01 100.0% 82.9%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 51.0 4.20e-01 100.0% 64.1%
1lshA01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.56 50.0 3.50e-01 100.0% 89.0%
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 49.0 3.89e-01 100.0% 61.0%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 39.0 4.31e-01 100.0% 96.9%
4xmeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 46.0 3.70e-01 100.0% 64.1%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 46.0 3.69e-01 97.5% 49.1%
3qkgA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 47.0 3.83e-01 100.0% 67.1%
2r4iA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 43.0 3.80e-01 88.9% 90.2%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 45.0 3.80e-01 100.0% 68.6%
4wsfA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 45.0 4.10e-01 100.0% 71.2%
2gtlM02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.53 45.0 3.67e-01 100.0% 72.3%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.53 46.0 3.79e-01 100.0% 80.9%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 46.0 3.94e-01 100.0% 86.3%
2ichA01 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.52 44.0 3.54e-01 100.0% 86.6%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 35.0 3.97e-01 97.5% 100.0%
4be3A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 2.89e-01 92.6% 50.6%
7emfR01 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.50 39.0 3.09e-01 85.2% 78.3%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3927305 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 56.0 5.11e-01 100.0% 81.8%
3585032 9.1.1.50 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7042 0.64 57.0 4.87e-01 100.0% 70.0%
5033471 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.60 53.0 4.88e-01 100.0% 95.2%
4997729 9.24.1.2 ↗ beta barrels › Lipocalins/Streptavidin › hypothetical protein BACOVA_00364 › hypothetical protein BACOVA_00364 › Lipocalin_5 0.59 53.0 4.47e-01 98.8% 71.9%
3861569 220.1.1.56 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH 0.59 52.0 4.66e-01 100.0% 71.3%
3970639 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 4.51e-01 100.0% 70.9%
3775836 220.1.1.56 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH 0.57 51.0 4.64e-01 100.0% 73.6%
4928923 4200.1.1.0 ↗ beta barrels › YmcC-like › YmcC-like › YmcC-like 0.57 50.0 3.83e-01 100.0% 79.5%
5033887 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.54 43.0 3.90e-01 88.9% 93.9%
3587744 9.9.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 0.54 47.0 4.00e-01 100.0% 95.7%
3767975 220.1.1.38 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.53 45.0 4.12e-01 100.0% 71.8%
4887870 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.52 45.0 3.67e-01 100.0% 61.8%
3999507 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 37.0 3.93e-01 100.0% 85.7%
3946522 9.1.1.36 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3833 0.52 44.0 3.70e-01 100.0% 84.5%
3526900 269.1.1.0 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like 0.52 44.0 2.90e-01 100.0% 31.0%
183289 5084.1.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TbpB_B_D 0.51 44.0 3.69e-01 100.0% 68.4%
3583243 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 37.0 3.50e-01 100.0% 61.9%
3989353 9.9.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 0.50 44.0 3.86e-01 100.0% 98.4%