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IMGVR_UViG_3300019376_000113-3300019376-Ga0187899_100042821
Arc-VirIMGVR_UViG_3300019376_000113-3300019376-Ga0187899_100042821
Identity
- Kingdom:
- archaea
Quality
89.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-67
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xvtC00 | 1.10.150.510 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family | 0.71 | 57.0 | 5.45e-01 | 88.1% | 83.5% |
| 2f5gA00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.62 | 49.0 | 3.95e-01 | 86.6% | 60.8% |
| 4o92A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 45.0 | 3.99e-01 | 83.6% | 68.6% |
| 1yy7A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 45.0 | 3.91e-01 | 83.6% | 66.7% |
| 3nkzA00 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.56 | 39.0 | 3.53e-01 | 73.1% | 69.1% |
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.54 | 39.0 | 4.08e-01 | 82.1% | 94.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3500715 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.76 | 65.0 | 6.10e-01 | 92.5% | 91.3% |
| 3840125 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 49.0 | 4.26e-01 | 70.1% | 71.4% |
| 3705869 | 192.17.1.15 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › DUF7623 | 0.70 | 49.0 | 4.73e-01 | 74.6% | 65.3% |
| 4025637 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.65 | 55.0 | 4.37e-01 | 100.0% | 82.0% |
D2
high
residues 69-166
Domain cluster:
rep: MK962753.1__QEG05497.1__JK32_00186__00186__D143-275
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03496.21 best | ADPrib_exo_Tox | 32.4 | 8.00e-08 | 91.8% | 36.4% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ojqA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.86 | 82.0 | 6.16e-01 | 100.0% | 63.7% |
| 4fk7A00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.85 | 80.0 | 6.16e-01 | 100.0% | 64.5% |
| 4xsgB00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.84 | 79.0 | 6.03e-01 | 100.0% | 64.4% |
| 4h03A02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.84 | 79.0 | 6.06e-01 | 100.0% | 62.9% |
| 1gzeA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.84 | 79.0 | 6.02e-01 | 100.0% | 60.9% |
| 1qs1A02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.84 | 79.0 | 6.10e-01 | 100.0% | 61.4% |
| 2j3vA02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.83 | 79.0 | 5.94e-01 | 100.0% | 64.6% |
| 5wtzA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.81 | 76.0 | 5.76e-01 | 100.0% | 58.7% |
| 2gwlA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.79 | 74.0 | 5.73e-01 | 100.0% | 63.5% |
| 2j3xA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.79 | 73.0 | 5.51e-01 | 100.0% | 56.9% |
| 3u0jA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.79 | 74.0 | 5.43e-01 | 100.0% | 46.6% |
| 1yqyA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.78 | 73.0 | 5.59e-01 | 100.0% | 61.3% |
| 1gxyA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.77 | 71.0 | 5.34e-01 | 100.0% | 43.9% |
| 4xzjA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.77 | 71.0 | 5.43e-01 | 100.0% | 52.1% |
| 2wn5A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.75 | 69.0 | 5.46e-01 | 100.0% | 63.9% |
| 6k93A00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.74 | 67.0 | 4.99e-01 | 100.0% | 43.5% |
| 2auaA01 | 3.20.170.10 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › ADP-ribosylation domain | 0.62 | 53.0 | 5.20e-01 | 94.9% | 93.5% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 31.0 | 3.51e-01 | 82.7% | 70.0% |
| 1g2bA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 35.0 | 4.17e-01 | 95.9% | 98.4% |
| 4ifdI01 | 2.40.50.880 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 39.0 | 4.14e-01 | 75.5% | 94.2% |
| 3vueA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 40.0 | 2.95e-01 | 77.6% | 99.3% |
| 3c18A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.53 | 30.0 | 2.86e-01 | 96.9% | 46.1% |
| 4oo1I01 | 2.40.50.880 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 35.0 | 3.86e-01 | 80.6% | 93.3% |
| 4rg1A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 32.0 | 3.67e-01 | 81.6% | 93.8% |
| 2bhvB01 | 2.40.128.260 | Mainly Beta › Beta Barrel › Lipocalin › Type IV secretion system, VirB10/TraB/TrbI | 0.51 | 37.0 | 3.27e-01 | 79.6% | 98.8% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954547 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.97 | 95.0 | 7.13e-01 | 100.0% | 49.0% |
| 4952387 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.92 | 87.0 | 8.05e-01 | 100.0% | 81.5% |
| 7442 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.86 | 82.0 | 6.16e-01 | 100.0% | 63.7% |
| 4277383 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.85 | 80.0 | 5.92e-01 | 100.0% | 59.6% |
| 1562728 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.84 | 79.0 | 6.03e-01 | 100.0% | 64.4% |
| 7440 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.84 | 79.0 | 6.10e-01 | 100.0% | 61.4% |
| 157262 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.84 | 79.0 | 5.98e-01 | 100.0% | 60.6% |
| 1893388 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.84 | 79.0 | 5.98e-01 | 100.0% | 63.2% |
| 308103 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.83 | 78.0 | 5.91e-01 | 100.0% | 64.0% |
| 4626477 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.82 | 77.0 | 6.29e-01 | 100.0% | 60.0% |
| 2034328 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.81 | 76.0 | 5.78e-01 | 100.0% | 59.2% |
| 2402651 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.80 | 75.0 | 5.78e-01 | 100.0% | 51.0% |
| 4563308 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.79 | 74.0 | 5.67e-01 | 100.0% | 61.1% |
| 2410012 | 237.1.1.2 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART | 0.77 | 71.0 | 5.59e-01 | 100.0% | 51.9% |
| 1687631 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.77 | 71.0 | 5.36e-01 | 100.0% | 49.8% |
| 3591227 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.76 | 68.0 | 4.90e-01 | 100.0% | 36.3% |
| 3561821 | 237.1.1.2 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART | 0.75 | 68.0 | 5.05e-01 | 100.0% | 42.0% |
| 4424922 | 237.1.1.34 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART, ADPrib_exo_Tox | 0.75 | 68.0 | 5.14e-01 | 100.0% | 43.4% |
| 2439575 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.74 | 68.0 | 5.19e-01 | 100.0% | 61.1% |
| 3847347 | 237.1.1.2 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART | 0.73 | 67.0 | 5.03e-01 | 100.0% | 44.3% |
| 3534305 | 237.1.1.2 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART | 0.73 | 66.0 | 4.97e-01 | 100.0% | 42.4% |
| 3714758 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.73 | 67.0 | 4.92e-01 | 100.0% | 49.8% |
| 3612144 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.72 | 66.0 | 4.46e-01 | 100.0% | 34.1% |
| 5047472 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 35.0 | 4.19e-01 | 84.7% | 98.5% |
| 3530890 | 2004.1.1.402 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CABIT | 0.54 | 35.0 | 3.71e-01 | 87.8% | 75.0% |
| 4576982 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.53 | 37.0 | 2.89e-01 | 98.0% | 30.2% |
| 1851633 | 316.1.1.22 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTF-like | 0.53 | 30.0 | 2.88e-01 | 96.9% | 46.5% |
| 3991745 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.52 | 34.0 | 3.60e-01 | 100.0% | 76.5% |
| 3788192 | 325.1.8.5 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › CSL4_N | 0.52 | 37.0 | 3.88e-01 | 100.0% | 81.8% |
| 3282486 | 2.1.1.262 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31148 | 0.51 | 31.0 | 3.81e-01 | 82.7% | 100.0% |
| 4963531 | 2.1.1.262 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31148 | 0.51 | 31.0 | 3.78e-01 | 81.6% | 98.3% |
| 4214302 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.50 | 37.0 | 2.97e-01 | 99.0% | 35.5% |
| 3715326 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.50 | 35.0 | 3.64e-01 | 89.8% | 78.9% |
| 4349227 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.50 | 36.0 | 2.77e-01 | 100.0% | 30.6% |