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IMGVR_UViG_3300019487_000071-3300019487-Ga0187893_1000332510
Arc-VirIMGVR_UViG_3300019487_000071-3300019487-Ga0187893_1000332510
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-140
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 33.0 | 4.59e-01 | 76.2% | 100.0% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 37.0 | 4.70e-01 | 81.9% | 88.9% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 36.0 | 4.69e-01 | 94.3% | 100.0% |
| 1epwA04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.61 | 44.0 | 3.63e-01 | 76.2% | 100.0% |
| 3pieB05 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 34.0 | 4.20e-01 | 76.2% | 90.6% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 35.0 | 3.62e-01 | 98.1% | 60.0% |
| 1avwB00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.57 | 43.0 | 3.70e-01 | 80.0% | 94.2% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 35.0 | 4.05e-01 | 95.2% | 86.7% |
| 3cp3A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 34.0 | 3.24e-01 | 85.7% | 52.0% |
| 3wa1A01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 43.0 | 3.81e-01 | 89.5% | 100.0% |
| 1mkeA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 41.0 | 3.74e-01 | 83.8% | 61.8% |
| 1iarB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 28.0 | 2.93e-01 | 78.1% | 56.2% |
| 1ejeA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 34.0 | 2.85e-01 | 96.2% | 37.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3457163 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.65 | 38.0 | 4.35e-01 | 85.7% | 77.5% |
| 3815495 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.63 | 39.0 | 4.62e-01 | 82.9% | 91.4% |
| 3290564 | 4.1.1.292 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 | 0.62 | 41.0 | 4.46e-01 | 80.0% | 78.9% |
| 3999507 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 39.0 | 4.69e-01 | 81.9% | 95.7% |
| 3373583 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 39.0 | 4.60e-01 | 81.9% | 94.3% |
| 3743464 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.60 | 40.0 | 4.67e-01 | 94.3% | 97.3% |
| 3556321 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.58 | 39.0 | 4.45e-01 | 81.9% | 90.0% |
| 3501574 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.58 | 39.0 | 4.54e-01 | 81.9% | 96.0% |
| 3828371 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.58 | 36.0 | 3.96e-01 | 81.9% | 76.5% |
| 3873394 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.56 | 43.0 | 3.86e-01 | 83.8% | 60.6% |
| None | — | 0.56 | 43.0 | 3.88e-01 | 83.8% | 62.7% | |
| 3176702 | 219.1.1.115 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C | 0.55 | 40.0 | 3.55e-01 | 84.8% | 52.3% |
| 3403399 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.55 | 42.0 | 4.14e-01 | 83.8% | 84.3% |
| 3782313 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.55 | 34.0 | 3.95e-01 | 79.0% | 88.0% |
| 3170649 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.54 | 37.0 | 4.14e-01 | 76.2% | 89.4% |
| 3880215 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.52 | 34.0 | 2.95e-01 | 81.9% | 42.5% |
| 3279362 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.52 | 37.0 | 3.26e-01 | 73.3% | 66.7% |
| 3592221 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 38.0 | 3.76e-01 | 83.8% | 71.2% |
| 3396964 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 31.0 | 3.30e-01 | 84.8% | 70.0% |
D2
high
residues 151-252
Domain cluster:
rep: IMGVR_UViG_3300019487_000071-3300019487-Ga0187893_1000332514__D159-255
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.60 | 29.0 | 3.21e-01 | 73.5% | 53.6% |
| 1jkfA03 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.57 | 33.0 | 4.03e-01 | 84.3% | 95.0% |
| 4hrzB00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 41.0 | 3.94e-01 | 93.1% | 64.2% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.56 | 40.0 | 3.54e-01 | 90.2% | 49.7% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.56 | 30.0 | 3.77e-01 | 75.5% | 92.9% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.55 | 34.0 | 4.09e-01 | 78.4% | 100.0% |
| 2xklA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 45.0 | 4.01e-01 | 90.2% | 69.8% |
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.54 | 31.0 | 3.77e-01 | 80.4% | 93.2% |
| 1jb7A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 38.0 | 3.27e-01 | 75.5% | 94.1% |
| 2f86B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 40.0 | 3.69e-01 | 81.4% | 89.1% |
| 5o46A00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 38.0 | 3.71e-01 | 78.4% | 79.8% |
| 5tgnA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 40.0 | 3.92e-01 | 85.3% | 91.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3982999 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.67 | 47.0 | 4.79e-01 | 85.3% | 74.0% |
| 3477686 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 39.0 | 4.57e-01 | 72.5% | 100.0% |
| 3931053 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.56 | 45.0 | 4.56e-01 | 84.3% | 96.0% |
| 5054019 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 34.0 | 3.93e-01 | 74.5% | 92.9% |
| 4886751 | 4010.1.1.0 ↗ | a+b complex topology › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase | 0.53 | 27.0 | 2.97e-01 | 87.3% | 55.3% |
| 4003463 | 220.1.1.168 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 | 0.53 | 36.0 | 3.40e-01 | 70.6% | 64.0% |
| 3697761 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.51 | 39.0 | 3.01e-01 | 81.4% | 88.0% |
| 3197303 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.51 | 39.0 | 2.98e-01 | 81.4% | 85.7% |
| 3283411 | 243.1.1.7 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MecA_N | 0.51 | 41.0 | 4.02e-01 | 87.3% | 90.0% |
| 3950922 | 243.1.1.80 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26580 | 0.51 | 43.0 | 4.14e-01 | 98.0% | 80.0% |
| 3706741 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.50 | 37.0 | 2.81e-01 | 77.5% | 35.5% |