←Back to structures
IMGVR_UViG_3300019487_000071-3300019487-Ga0187893_1000332524
Arc-VirIMGVR_UViG_3300019487_000071-3300019487-Ga0187893_1000332524
Identity
- Kingdom:
- archaea
Quality
78.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-113
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mh6A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.90 | 72.0 | 6.05e-01 | 83.2% | 79.9% |
| 2dw4A03 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.90 | 77.0 | 7.77e-01 | 89.1% | 92.1% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.87 | 59.0 | 6.39e-01 | 71.3% | 81.4% |
| 3vkgA12 | 1.10.287.2610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.86 | 79.0 | 6.08e-01 | 100.0% | 80.5% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.85 | 58.0 | 6.55e-01 | 70.3% | 92.4% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.85 | 78.0 | 5.85e-01 | 100.0% | 60.6% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.83 | 59.0 | 5.10e-01 | 78.2% | 50.3% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.83 | 63.0 | 6.22e-01 | 81.2% | 74.8% |
| 5y06A01 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.83 | 76.0 | 5.75e-01 | 100.0% | 52.4% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.81 | 68.0 | 5.20e-01 | 89.1% | 43.2% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 58.0 | 5.80e-01 | 75.2% | 73.5% |
| 3u0cA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.78 | 71.0 | 6.09e-01 | 97.0% | 87.4% |
| 4hkaA01 | 1.20.58.480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 52.0 | 3.65e-01 | 73.3% | 23.5% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 49.0 | 5.90e-01 | 73.3% | 98.5% |
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.75 | 50.0 | 4.90e-01 | 70.3% | 62.7% |
| 4biuE01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.74 | 57.0 | 5.82e-01 | 85.1% | 83.7% |
| 4mtxD00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.74 | 55.0 | 5.71e-01 | 78.2% | 100.0% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.74 | 51.0 | 5.24e-01 | 70.3% | 88.5% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 54.0 | 4.68e-01 | 77.2% | 53.1% |
| 4ke2A00 | 6.10.140.1860 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 63.0 | 5.02e-01 | 96.0% | 71.4% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 48.0 | 4.56e-01 | 75.2% | 59.2% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3657504 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.92 | 69.0 | 6.13e-01 | 77.2% | 73.3% |
| 3880244 | 603.2.1.24 ↗ | alpha bundles › STAT-like › STAT › STAT › TBCA_PH | 0.89 | 68.0 | 5.78e-01 | 81.2% | 51.6% |
| 3401214 | 3755.3.1.345 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Hobbit | 0.89 | 60.0 | 5.23e-01 | 75.2% | 48.3% |
| 3880637 | 3755.3.1.465 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A | 0.89 | 78.0 | 6.86e-01 | 92.1% | 69.3% |
| 3272245 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.88 | 60.0 | 4.27e-01 | 72.3% | 26.3% |
| 3408277 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.87 | 69.0 | 6.57e-01 | 84.2% | 72.2% |
| 3456370 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.87 | 82.0 | 6.96e-01 | 100.0% | 80.0% |
| 3725261 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.87 | 81.0 | 5.65e-01 | 100.0% | 36.3% |
| 4883406 | 622.4.1.1 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Blo-t-5 | 0.87 | 57.0 | 5.44e-01 | 70.3% | 58.6% |
| 3464261 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.87 | 70.0 | 5.73e-01 | 84.2% | 50.6% |
| 3974536 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.86 | 64.0 | 4.06e-01 | 76.2% | 30.1% |
| 3402327 | 3755.3.1.324 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF725 | 0.86 | 80.0 | 6.61e-01 | 100.0% | 60.6% |
| 5006401 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.85 | 72.0 | 6.25e-01 | 88.1% | 79.3% |
| 4516988 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.85 | 71.0 | 6.27e-01 | 88.1% | 66.4% |
| 3207569 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.85 | 79.0 | 6.16e-01 | 100.0% | 55.0% |
| 3435096 | 192.29.1.216 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF632 | 0.84 | 66.0 | 6.19e-01 | 81.2% | 70.0% |
| 3716535 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.84 | 78.0 | 5.33e-01 | 100.0% | 45.8% |
| 4990488 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.84 | 63.0 | 6.36e-01 | 78.2% | 100.0% |
| 3486831 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.83 | 77.0 | 5.64e-01 | 100.0% | 40.8% |
| 4932755 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.82 | 73.0 | 5.68e-01 | 97.0% | 46.8% |
| 3676126 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.82 | 73.0 | 5.64e-01 | 94.1% | 47.0% |
| 3379082 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.82 | 71.0 | 4.31e-01 | 93.1% | 25.6% |
| 4459896 | 622.4.1.1 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Blo-t-5 | 0.82 | 56.0 | 5.38e-01 | 70.3% | 66.7% |
| 4446057 | 192.8.1.345 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › PF30463 | 0.82 | 77.0 | 5.86e-01 | 100.0% | 48.4% |
| 1171038 | 3755.3.1.148 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CT398_CC | 0.82 | 75.0 | 6.01e-01 | 100.0% | 74.9% |
| 3671258 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.81 | 71.0 | 6.45e-01 | 92.1% | 76.2% |
| 3843241 | 108.1.1.25 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_4 | 0.81 | 74.0 | 5.43e-01 | 100.0% | 53.5% |
| 3547040 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.81 | 75.0 | 6.18e-01 | 99.0% | 71.2% |
| 4210642 | 3755.1.1.12 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › CheZ | 0.80 | 68.0 | 6.27e-01 | 95.0% | 71.5% |
| 4184330 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.80 | 56.0 | 5.71e-01 | 75.2% | 73.0% |
| 3990125 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.80 | 53.0 | 5.31e-01 | 75.2% | 65.7% |
| 3583684 | 148.1.3.11 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MT | 0.80 | 73.0 | 5.30e-01 | 100.0% | 71.1% |
| 4076629 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.79 | 72.0 | 5.22e-01 | 100.0% | 37.5% |
| 5041482 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.79 | 62.0 | 6.35e-01 | 82.2% | 87.4% |
| 4136919 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.79 | 70.0 | 5.68e-01 | 97.0% | 68.6% |
| 3231463 | 632.8.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › Alpha-2-MRAP_C | 0.78 | 53.0 | 5.51e-01 | 70.3% | 74.7% |
| 5008718 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.78 | 69.0 | 4.41e-01 | 96.0% | 35.4% |
| 4257134 | 192.5.1.35 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › Hobbit | 0.78 | 53.0 | 5.37e-01 | 72.3% | 71.0% |
| 3964486 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.77 | 66.0 | 5.61e-01 | 92.1% | 73.1% |
| 3605251 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.77 | 69.0 | 5.31e-01 | 96.0% | 81.4% |
| 3563649 | 148.1.3.254 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › KIF21A_4th | 0.77 | 69.0 | 4.57e-01 | 95.0% | 42.2% |
| 3252533 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.77 | 55.0 | 4.22e-01 | 74.3% | 34.9% |
| 5063166 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.76 | 55.0 | 5.50e-01 | 77.2% | 72.4% |
| 5080472 | 3834.1.1.0 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain | 0.76 | 69.0 | 4.39e-01 | 100.0% | 31.6% |
| 3615471 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.76 | 61.0 | 5.91e-01 | 88.1% | 77.3% |
| 3079134 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.76 | 54.0 | 3.71e-01 | 73.3% | 23.4% |
| 3659986 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.76 | 53.0 | 3.86e-01 | 72.3% | 29.1% |
| 4984240 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.75 | 69.0 | 4.22e-01 | 100.0% | 29.3% |
| 3254975 | 603.2.1.2 ↗ | alpha bundles › STAT-like › STAT › STAT › Dict-STAT-coil | 0.75 | 52.0 | 4.97e-01 | 73.3% | 62.6% |
| 4682501 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.74 | 50.0 | 5.12e-01 | 72.3% | 70.0% |
| 3972236 | 3755.3.1.42 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CheZ | 0.73 | 66.0 | 5.44e-01 | 99.0% | 61.7% |
| 3408532 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.73 | 60.0 | 5.04e-01 | 88.1% | 52.4% |
| 3229095 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.73 | 56.0 | 5.65e-01 | 81.2% | 82.0% |
| 4665988 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.73 | 53.0 | 5.26e-01 | 76.2% | 73.3% |
| 4076285 | 3755.1.1.12 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › CheZ | 0.72 | 65.0 | 5.83e-01 | 99.0% | 72.9% |
| 4946275 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.72 | 63.0 | 4.64e-01 | 96.0% | 75.8% |
| 3795763 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.70 | 63.0 | 4.04e-01 | 100.0% | 79.0% |
| 3852268 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.70 | 60.0 | 5.05e-01 | 92.1% | 57.1% |
| 3511712 | 5069.1.3.66 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › 7TM_GPCR_Srw | 0.68 | 49.0 | 4.42e-01 | 75.2% | 55.6% |