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IMGVR_UViG_3300019487_000071-3300019487-Ga0187893_1000332581
Arc-VirIMGVR_UViG_3300019487_000071-3300019487-Ga0187893_1000332581
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-169
Domain cluster:
rep: OL829978.1__UMO76312.1__SEA_TOMAS_135__00123__D25-169
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hpcX00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.59 | 35.0 | 3.30e-01 | 73.4% | 49.7% |
| 3kkbA00 | 1.20.120.880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain | 0.56 | 39.0 | 3.92e-01 | 98.4% | 70.6% |
| 3h7oB01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 34.0 | 3.58e-01 | 100.0% | 69.0% |
| 1si5H01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 32.0 | 3.35e-01 | 99.2% | 64.7% |
| 1s3rA04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.51 | 30.0 | 3.27e-01 | 100.0% | 68.5% |
| 4obmA00 | 3.40.630.190 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein | 0.51 | 36.0 | 2.93e-01 | 73.4% | 68.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5059000 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.59 | 28.0 | 3.24e-01 | 98.4% | 60.0% |
| 3649347 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.52 | 29.0 | 2.79e-01 | 100.0% | 47.6% |
| 3224590 | 306.10.1.2 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 › H1_KCTD8_12_16 | 0.51 | 41.0 | 4.18e-01 | 93.8% | 90.4% |
| 3538666 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.50 | 32.0 | 2.72e-01 | 100.0% | 36.4% |