←Back to structures
IMGVR_UViG_3300019924_000137-3300019924-Ga0207182_10007511
Arc-VirIMGVR_UViG_3300019924_000137-3300019924-Ga0207182_10007511
Identity
- Kingdom:
- archaea
Quality
89.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-61
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fgvA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 53.0 | 4.58e-01 | 77.0% | 51.6% |
| 6lpnA04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 48.0 | 4.17e-01 | 75.4% | 47.4% |
| 2nzcB00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.68 | 47.0 | 4.30e-01 | 75.4% | 54.3% |
| 3h3gA03 | 4.10.1240.10 | Few Secondary Structures › Irregular › Hormone receptor fold › GPCR, family 2, extracellular hormone receptor domain | 0.67 | 48.0 | 4.10e-01 | 93.4% | 47.0% |
| 3viqA00 | 6.10.140.1020 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 51.0 | 4.13e-01 | 85.2% | 67.2% |
| 2rffA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.66 | 51.0 | 4.25e-01 | 85.2% | 56.8% |
| 4hl9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 48.0 | 4.24e-01 | 80.3% | 52.1% |
| 7xinA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.65 | 45.0 | 3.75e-01 | 83.6% | 41.3% |
| 2x8xX01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.64 | 43.0 | 4.04e-01 | 70.5% | 96.1% |
| 2felA00 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.63 | 53.0 | 3.37e-01 | 98.4% | 46.3% |
| 1f0xA04 | 3.30.1370.20 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › D-lactate dehydrogenase, cap domain, subdomain 2 | 0.63 | 43.0 | 3.87e-01 | 75.4% | 51.8% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 44.0 | 3.87e-01 | 80.3% | 49.0% |
| 6l3tA01 | 1.20.1440.80 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain | 0.61 | 53.0 | 3.75e-01 | 100.0% | 69.3% |
| 2gffA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 46.0 | 4.02e-01 | 83.6% | 53.1% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 40.0 | 3.80e-01 | 70.5% | 55.7% |
| 1tuwA00 | 3.30.70.1090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. | 0.60 | 43.0 | 3.59e-01 | 75.4% | 47.2% |
| 1n6zA00 | 3.10.20.250 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › YML108W-like | 0.60 | 44.0 | 3.76e-01 | 80.3% | 85.7% |
| 2pb2B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 43.0 | 3.38e-01 | 78.7% | 69.7% |
| 6c6uN00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.60 | 42.0 | 3.66e-01 | 75.4% | 50.0% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 43.0 | 3.68e-01 | 80.3% | 73.6% |
| 1jmuB01 | 3.90.1370.10 | Alpha Beta › Alpha-Beta Complex › Protein mu-1, chain B, domain 1 › Protein mu-1, chain B, domain 1 | 0.59 | 48.0 | 3.96e-01 | 95.1% | 92.5% |
| 3pqvC01 | 3.65.10.20 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain | 0.59 | 46.0 | 3.05e-01 | 86.9% | 29.4% |
| 5xnyA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.59 | 49.0 | 3.37e-01 | 100.0% | 97.5% |
| 6hhnA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 40.0 | 3.57e-01 | 75.4% | 54.3% |
| 3lw6A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.57 | 40.0 | 2.72e-01 | 75.4% | 32.0% |
| 6zxfz01 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.57 | 41.0 | 3.31e-01 | 77.0% | 93.5% |
| 2bj3D02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.57 | 38.0 | 3.52e-01 | 77.0% | 53.1% |
| 2rt3A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 36.0 | 3.16e-01 | 73.8% | 40.2% |
| 2jdjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 42.0 | 3.65e-01 | 83.6% | 53.8% |
| 2xmjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 36.0 | 3.65e-01 | 72.1% | 63.5% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.56 | 39.0 | 3.59e-01 | 75.4% | 54.8% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.55 | 38.0 | 2.93e-01 | 93.4% | 32.1% |
| 5fiiB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 37.0 | 3.47e-01 | 70.5% | 61.5% |
| 3qi7A03 | 3.30.30.130 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.55 | 37.0 | 4.00e-01 | 72.1% | 100.0% |
| 1jmtA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 44.0 | 3.81e-01 | 90.2% | 64.3% |
| 6vq6H01 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 45.0 | 3.18e-01 | 100.0% | 43.1% |
| 4x0qA03 | 3.30.70.370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 38.0 | 3.00e-01 | 80.3% | 64.3% |
| 3klxB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 40.0 | 2.96e-01 | 88.5% | 56.9% |
| 1x8dA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 38.0 | 3.39e-01 | 83.6% | 54.6% |
| 1qhdA02 | 1.10.1350.10 | Mainly Alpha › Orthogonal Bundle › Viral capsid alpha domain › Viral capsid alpha domain | 0.51 | 42.0 | 2.99e-01 | 100.0% | 73.1% |
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.51 | 35.0 | 3.06e-01 | 72.1% | 90.6% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5067204 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.78 | 59.0 | 4.14e-01 | 82.0% | 28.4% |
| 3289745 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.71 | 52.0 | 4.53e-01 | 78.7% | 54.7% |
| 4980617 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.71 | 47.0 | 4.32e-01 | 70.5% | 51.9% |
| 3973541 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.71 | 52.0 | 4.49e-01 | 78.7% | 54.7% |
| 4523483 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.70 | 46.0 | 4.35e-01 | 70.5% | 54.7% |
| 3390313 | 304.4.1.53 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › R1_ABCA1 | 0.70 | 47.0 | 4.23e-01 | 70.5% | 50.6% |
| 3784357 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.69 | 52.0 | 3.44e-01 | 80.3% | 38.7% |
| 4239881 | 328.3.1.2 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 | 0.69 | 51.0 | 4.10e-01 | 82.0% | 39.2% |
| 4231117 | 328.3.1.2 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 | 0.69 | 46.0 | 3.80e-01 | 70.5% | 38.2% |
| 4521600 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.69 | 51.0 | 3.59e-01 | 82.0% | 78.4% |
| 3402258 | 304.8.1.49 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 | 0.68 | 50.0 | 4.23e-01 | 78.7% | 48.0% |
| 3625482 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.67 | 50.0 | 4.34e-01 | 86.9% | 49.5% |
| 5041003 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.66 | 44.0 | 4.10e-01 | 70.5% | 52.6% |
| 4977748 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.66 | 45.0 | 4.15e-01 | 75.4% | 55.0% |
| 4980612 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.65 | 44.0 | 4.12e-01 | 70.5% | 53.8% |
| 3590646 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.65 | 45.0 | 3.60e-01 | 72.1% | 48.0% |
| 4998406 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.65 | 44.0 | 4.09e-01 | 75.4% | 53.8% |
| 5053356 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.65 | 46.0 | 4.06e-01 | 77.0% | 52.6% |
| 4978118 | 241.1.1.5 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2299 | 0.64 | 47.0 | 3.53e-01 | 78.7% | 32.3% |
| 4183868 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.64 | 47.0 | 4.34e-01 | 78.7% | 64.6% |
| 3650582 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 43.0 | 4.20e-01 | 70.5% | 65.2% |
| 3619851 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.63 | 48.0 | 4.32e-01 | 86.9% | 57.8% |
| 4033519 | 243.3.1.30 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3139 | 0.63 | 44.0 | 3.97e-01 | 73.8% | 54.1% |
| 4991207 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.61 | 41.0 | 3.74e-01 | 75.4% | 48.9% |
| 3672127 | 2003.1.5.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Ubie_methyltran | 0.61 | 50.0 | 3.82e-01 | 96.7% | 98.1% |
| 4993906 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.60 | 44.0 | 3.52e-01 | 82.0% | 82.9% |
| 3329453 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.60 | 44.0 | 3.46e-01 | 82.0% | 80.0% |
| 5010169 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.60 | 41.0 | 3.79e-01 | 75.4% | 53.0% |
| 5054049 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 43.0 | 3.61e-01 | 80.3% | 87.8% |
| 4532543 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 42.0 | 3.40e-01 | 80.3% | 92.1% |
| 3670395 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 42.0 | 3.93e-01 | 77.0% | 61.3% |
| 5035139 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 43.0 | 3.45e-01 | 82.0% | 74.8% |
| 4567496 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.58 | 43.0 | 4.07e-01 | 80.3% | 65.3% |
| 3793391 | 304.28.1.30 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SCVP | 0.58 | 44.0 | 3.75e-01 | 85.2% | 48.2% |
| 4975141 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.58 | 38.0 | 3.66e-01 | 72.1% | 56.0% |
| 5036199 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 41.0 | 3.88e-01 | 77.0% | 65.3% |
| 3648957 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.58 | 40.0 | 2.99e-01 | 73.8% | 35.9% |
| 3591216 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.57 | 38.0 | 3.50e-01 | 70.5% | 52.9% |
| 3731471 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.57 | 42.0 | 3.60e-01 | 83.6% | 47.3% |
| 5022380 | 3755.3.1.632 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Prefoldin | 0.56 | 41.0 | 3.24e-01 | 82.0% | 77.1% |
| 4303742 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.54 | 40.0 | 3.29e-01 | 82.0% | 66.7% |
| 4941487 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.54 | 40.0 | 3.28e-01 | 82.0% | 66.7% |
| 3289559 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.53 | 44.0 | 2.78e-01 | 90.2% | 24.0% |
| 4635238 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.53 | 45.0 | 3.97e-01 | 96.7% | 96.7% |
| 3252307 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 44.0 | 3.18e-01 | 95.1% | 56.2% |
| 4928856 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.52 | 37.0 | 3.33e-01 | 80.3% | 54.0% |
D2
medium
residues 62-134
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.67 | 57.0 | 5.65e-01 | 100.0% | 92.2% |
| 1vctA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.67 | 55.0 | 4.89e-01 | 100.0% | 62.4% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 50.0 | 4.95e-01 | 91.8% | 78.2% |
| 7rkxR01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.66 | 57.0 | 3.90e-01 | 100.0% | 27.1% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.63 | 52.0 | 5.32e-01 | 97.3% | 97.2% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.63 | 49.0 | 5.11e-01 | 98.6% | 98.4% |
| 1wfdA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.62 | 46.0 | 4.33e-01 | 89.0% | 63.4% |
| 3fhnA01 | 6.10.280.210 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain A | 0.62 | 52.0 | 3.92e-01 | 93.2% | 48.4% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.62 | 48.0 | 4.62e-01 | 93.2% | 72.4% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.62 | 53.0 | 5.08e-01 | 100.0% | 89.7% |
| 4gtnA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.62 | 31.0 | 3.14e-01 | 100.0% | 45.9% |
| 6zhiB02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.62 | 46.0 | 4.45e-01 | 91.8% | 71.1% |
| 2g38B00 | 1.20.1260.20 | Mainly Alpha › Up-down Bundle › Ferritin › PPE superfamily | 0.62 | 54.0 | 4.15e-01 | 100.0% | 45.1% |
| 2d9dA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.62 | 45.0 | 4.30e-01 | 93.2% | 65.2% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.61 | 52.0 | 4.66e-01 | 100.0% | 67.3% |
| 3zbhA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.61 | 52.0 | 4.96e-01 | 100.0% | 84.4% |
| 3ns4A00 | 1.10.357.110 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Vacuolar protein sorting-associated protein 53, C-terminus | 0.60 | 48.0 | 3.50e-01 | 87.7% | 43.9% |
| 3fd9A03 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.60 | 49.0 | 4.93e-01 | 100.0% | 94.5% |
| 1hciA04 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 51.0 | 4.50e-01 | 100.0% | 64.0% |
| 1dxrL02 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.59 | 50.0 | 4.45e-01 | 98.6% | 84.3% |
| 2a9uA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.59 | 46.0 | 3.94e-01 | 89.0% | 52.4% |
| 2vs0A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.58 | 49.0 | 4.84e-01 | 100.0% | 92.7% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.58 | 37.0 | 3.45e-01 | 71.2% | 51.1% |
| 1h8eG02 | 3.40.1380.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit | 0.58 | 51.0 | 3.86e-01 | 100.0% | 100.0% |
| 4e4eA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.57 | 47.0 | 4.80e-01 | 98.6% | 97.2% |
| 5dn6J00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.57 | 46.0 | 4.68e-01 | 94.5% | 94.6% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.57 | 48.0 | 4.67e-01 | 100.0% | 91.8% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.57 | 48.0 | 4.24e-01 | 100.0% | 68.4% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.56 | 49.0 | 4.20e-01 | 100.0% | 74.2% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.56 | 46.0 | 4.17e-01 | 100.0% | 75.0% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.55 | 47.0 | 4.21e-01 | 100.0% | 77.1% |
| 2lpeA01 | 6.10.140.1120 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 41.0 | 4.13e-01 | 94.5% | 89.7% |
| 3sqnA03 | 1.10.1790.30 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › | 0.51 | 38.0 | 3.31e-01 | 80.8% | 66.1% |
| 3crmA02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.50 | 33.0 | 3.19e-01 | 71.2% | 58.3% |
| 1l0oC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 37.0 | 4.06e-01 | 76.7% | 100.0% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3904356 | 3755.3.1.9 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › SH3BP5 | 0.71 | 60.0 | 4.36e-01 | 100.0% | 33.7% |
| 4039014 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.68 | 55.0 | 4.89e-01 | 100.0% | 60.9% |
| 3286299 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.68 | 55.0 | 4.87e-01 | 100.0% | 60.9% |
| 3387160 | 3755.1.1.8 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › FliJ | 0.66 | 57.0 | 4.65e-01 | 100.0% | 50.7% |
| 5029232 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.66 | 51.0 | 3.92e-01 | 100.0% | 35.0% |
| 3382610 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.64 | 56.0 | 3.84e-01 | 100.0% | 27.4% |
| 4018370 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.64 | 57.0 | 4.72e-01 | 100.0% | 69.2% |
| 3962961 | 150.5.1.53 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PPE | 0.64 | 55.0 | 5.42e-01 | 100.0% | 91.3% |
| 3716528 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.64 | 54.0 | 4.39e-01 | 94.5% | 50.0% |
| 3427954 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.64 | 55.0 | 4.51e-01 | 98.6% | 53.6% |
| 3703405 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.64 | 54.0 | 4.38e-01 | 94.5% | 50.0% |
| 3890044 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.64 | 53.0 | 5.42e-01 | 98.6% | 100.0% |
| 3282208 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.64 | 55.0 | 5.21e-01 | 100.0% | 81.1% |
| 3419838 | 109.4.1.359 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo70_C | 0.63 | 47.0 | 3.29e-01 | 86.3% | 23.3% |
| 4480484 | 150.5.1.11 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › T7SS_ESX_EspC | 0.63 | 52.0 | 4.83e-01 | 100.0% | 71.6% |
| 3628093 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.63 | 54.0 | 4.84e-01 | 100.0% | 71.4% |
| 4974229 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.62 | 54.0 | 4.14e-01 | 100.0% | 41.1% |
| 3829240 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.62 | 55.0 | 4.68e-01 | 100.0% | 60.8% |
| 3734403 | 1065.1.1.1 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain › SPX | 0.62 | 53.0 | 4.06e-01 | 100.0% | 43.8% |
| 3927738 | 632.8.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | 0.62 | 53.0 | 4.92e-01 | 100.0% | 75.8% |
| 3391706 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.62 | 51.0 | 4.34e-01 | 100.0% | 53.8% |
| 3723174 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.62 | 53.0 | 5.31e-01 | 100.0% | 100.0% |
| 3282251 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.62 | 53.0 | 4.50e-01 | 100.0% | 58.1% |
| 3291596 | 150.5.1.52 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PE | 0.61 | 53.0 | 4.84e-01 | 100.0% | 74.0% |
| 3942662 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.61 | 52.0 | 4.83e-01 | 100.0% | 76.8% |
| 3541873 | 3755.3.1.297 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF9 | 0.61 | 52.0 | 4.31e-01 | 100.0% | 72.9% |
| 5073974 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.60 | 51.0 | 5.11e-01 | 100.0% | 97.3% |
| 3884683 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.60 | 50.0 | 4.38e-01 | 97.3% | 96.7% |
| 4954909 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.60 | 42.0 | 4.04e-01 | 82.2% | 63.5% |
| 3682039 | 604.1.1.188 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Mito_carr | 0.60 | 50.0 | 4.51e-01 | 100.0% | 65.5% |
| 4053952 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.60 | 53.0 | 4.71e-01 | 100.0% | 93.3% |
| 3755586 | 3291.1.1.118 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › KIF9 | 0.59 | 51.0 | 4.23e-01 | 100.0% | 52.9% |
| 3599499 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.59 | 50.0 | 4.10e-01 | 100.0% | 49.3% |
| 4235156 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.59 | 51.0 | 4.37e-01 | 98.6% | 74.2% |
| 4156473 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.58 | 50.0 | 4.65e-01 | 100.0% | 88.4% |
| 3650596 | 603.1.1.61 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Mito_carr | 0.58 | 50.0 | 4.41e-01 | 98.6% | 68.2% |
| 3229576 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.58 | 39.0 | 3.85e-01 | 71.2% | 70.0% |
| 3494783 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.57 | 48.0 | 3.98e-01 | 95.9% | 89.3% |
| 4586684 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 48.0 | 4.05e-01 | 100.0% | 57.7% |
| 3707613 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.56 | 45.0 | 3.22e-01 | 91.8% | 29.6% |
| 3725040 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.56 | 43.0 | 3.04e-01 | 82.2% | 27.1% |
| 3738395 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.55 | 43.0 | 3.14e-01 | 89.0% | 51.9% |
| 4431851 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.55 | 48.0 | 4.03e-01 | 100.0% | 56.9% |
| 4058512 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.54 | 40.0 | 2.97e-01 | 82.2% | 32.9% |
| 4340554 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.53 | 41.0 | 2.95e-01 | 86.3% | 30.6% |
| 4019335 | 4336.2.1.0 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 | 0.53 | 47.0 | 4.11e-01 | 100.0% | 66.4% |
| 3716018 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.53 | 44.0 | 3.23e-01 | 100.0% | 50.9% |
| 3515411 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.51 | 43.0 | 3.24e-01 | 100.0% | 68.8% |
| 5074223 | 622.5.1.0 ↗ | alpha bundles › YvfG-like › Probable 26S proteasome regulatory subunit p27 › Probable 26S proteasome regulatory subunit p27 | 0.51 | 40.0 | 3.82e-01 | 89.0% | 83.3% |
| 3306023 | 5058.1.1.40 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › PF26576 | 0.51 | 39.0 | 3.43e-01 | 87.7% | 91.7% |
| 4025878 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.50 | 39.0 | 3.74e-01 | 87.7% | 72.9% |