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IMGVR_UViG_3300020056_002947-3300020056-Ga0181574_100111191

Arc-Vir

IMGVR_UViG_3300020056_002947-3300020056-Ga0181574_100111191

Quality

85.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 134-353
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13087.13 best AAA_12 114.6 6.30e-33 88.2% 88.2%
D2 medium residues 10-117
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sm7A00 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.58 41.0 4.14e-01 74.1% 90.8%
2yb5F01 1.20.1280.250 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.54 37.0 4.13e-01 90.7% 88.4%
4hz4A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.54 37.0 3.70e-01 70.4% 75.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4302483 3294.1.1.1 alpha complex topology › FAS type I helical domain › FAS type I helical domain › FAS type I helical domain › FAS_I_H 0.59 41.0 3.35e-01 72.2% 40.0%
4001230 109.4.1.1264 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16 0.57 45.0 3.47e-01 85.2% 61.6%
3303956 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 40.0 3.66e-01 76.9% 81.4%
3337529 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 40.0 3.45e-01 76.9% 72.1%