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IMGVR_UViG_3300020079_000070-3300020079-Ga0187906_100258010
Arc-VirIMGVR_UViG_3300020079_000070-3300020079-Ga0187906_100258010
Identity
- Kingdom:
- archaea
Quality
90.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-89
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 49.0 | 4.48e-01 | 100.0% | 54.9% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 53.0 | 4.60e-01 | 100.0% | 53.1% |
| 2guzA00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.68 | 48.0 | 4.38e-01 | 100.0% | 57.7% |
| 3msyA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.67 | 45.0 | 3.59e-01 | 100.0% | 35.1% |
| 3pvuA02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.67 | 58.0 | 5.16e-01 | 100.0% | 93.8% |
| 1fc6A01 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.65 | 44.0 | 3.67e-01 | 70.9% | 61.2% |
| 3anwB00 | 1.20.58.2050 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 49.0 | 3.45e-01 | 100.0% | 27.8% |
| 2qwoB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.64 | 50.0 | 4.17e-01 | 100.0% | 50.0% |
| 1mhyG02 | 1.20.1280.30 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 | 0.62 | 44.0 | 4.07e-01 | 98.2% | 57.5% |
| 2mpnA00 | 6.10.140.1340 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 51.0 | 4.81e-01 | 100.0% | 75.0% |
| 4ne4A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.61 | 48.0 | 3.50e-01 | 98.2% | 29.9% |
| 1u84A00 | 1.10.340.20 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain | 0.61 | 47.0 | 4.09e-01 | 96.4% | 55.6% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.60 | 52.0 | 4.34e-01 | 100.0% | 76.8% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.60 | 49.0 | 3.85e-01 | 100.0% | 42.7% |
| 1iuqA01 | 1.10.1200.50 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal | 0.60 | 48.0 | 4.46e-01 | 96.4% | 100.0% |
| 4od8D00 | 6.10.140.1880 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 43.0 | 4.52e-01 | 98.2% | 84.3% |
| 2aj6A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 46.0 | 3.62e-01 | 98.2% | 40.8% |
| 7tzoA01 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.58 | 46.0 | 3.45e-01 | 100.0% | 50.0% |
| 2k85A00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.57 | 44.0 | 4.22e-01 | 96.4% | 70.8% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.56 | 39.0 | 3.90e-01 | 100.0% | 70.5% |
| 4dkcB00 | 1.20.1250.80 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-34 | 0.56 | 46.0 | 3.42e-01 | 100.0% | 91.3% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.55 | 49.0 | 4.69e-01 | 98.2% | 98.4% |
| 1x3kA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 40.0 | 3.00e-01 | 80.0% | 51.0% |
| 2ekgB01 | 6.10.250.3270 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 40.0 | 4.05e-01 | 100.0% | 83.9% |
| 2ds2D01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.54 | 38.0 | 3.83e-01 | 100.0% | 73.7% |
| 4fqgB03 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.53 | 41.0 | 3.94e-01 | 98.2% | 75.8% |
| 2f33A03 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.53 | 42.0 | 3.74e-01 | 94.5% | 87.4% |
| 5a4uF02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 37.0 | 3.00e-01 | 96.4% | 34.7% |
| 1bhaA00 | 1.10.287.170 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 37.0 | 3.58e-01 | 100.0% | 64.2% |
| 1fpoC02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.52 | 32.0 | 2.79e-01 | 100.0% | 37.4% |
| 2o3fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.68e-01 | 96.4% | 61.0% |
| 1gvfB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 44.0 | 2.85e-01 | 100.0% | 22.9% |
| 1gcvB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 43.0 | 3.32e-01 | 100.0% | 39.7% |
| 3pubA01 | 1.10.10.2400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain | 0.50 | 36.0 | 3.39e-01 | 80.0% | 81.1% |
| 2ii2A04 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.50 | 43.0 | 3.86e-01 | 98.2% | 96.2% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3673226 | 622.2.1.0 ↗ | alpha bundles › YvfG-like › YvfG-like › YvfG-like | 0.74 | 46.0 | 4.68e-01 | 100.0% | 63.6% |
| 3876144 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.73 | 51.0 | 4.14e-01 | 72.7% | 58.0% |
| 3309954 | 1134.1.2.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Archaeal C-Ala helical domain | 0.73 | 49.0 | 5.39e-01 | 100.0% | 86.7% |
| 3922012 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 50.0 | 4.12e-01 | 72.7% | 50.5% |
| 3903726 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 46.0 | 4.56e-01 | 70.9% | 90.0% |
| 4015917 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 47.0 | 3.01e-01 | 74.5% | 41.9% |
| 5017793 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.67 | 55.0 | 5.45e-01 | 98.2% | 91.7% |
| 3275598 | 102.1.1.16 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_2 | 0.67 | 44.0 | 3.97e-01 | 94.5% | 50.7% |
| 3364607 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.65 | 45.0 | 3.88e-01 | 100.0% | 47.1% |
| 5065986 | 4957.1.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit | 0.64 | 44.0 | 4.42e-01 | 70.9% | 98.2% |
| 5016140 | 5060.1.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C › vATP-synt_AC39 | 0.64 | 55.0 | 4.44e-01 | 100.0% | 98.2% |
| 3844868 | 6088.1.1.2 ↗ | alpha arrays › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A › PF26051 | 0.64 | 48.0 | 4.35e-01 | 100.0% | 60.0% |
| 5006542 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.63 | 46.0 | 4.52e-01 | 100.0% | 73.3% |
| 3220792 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.62 | 43.0 | 3.72e-01 | 96.4% | 45.6% |
| 3579656 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.61 | 41.0 | 4.03e-01 | 98.2% | 65.0% |
| 4149240 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.57 | 39.0 | 3.70e-01 | 74.5% | 100.0% |
| 4970148 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.56 | 39.0 | 3.71e-01 | 72.7% | 100.0% |
| 3176372 | 3949.1.1.3 ↗ | alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › SLS1_N | 0.56 | 42.0 | 4.02e-01 | 87.3% | 82.9% |
| 3648220 | 611.3.1.1 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 | 0.56 | 40.0 | 3.85e-01 | 100.0% | 64.6% |
| 3596183 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.56 | 40.0 | 3.71e-01 | 78.2% | 78.7% |
| 3952621 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.56 | 40.0 | 3.74e-01 | 100.0% | 60.9% |
| 3561708 | 632.2.1.41 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › ALKL1_2 | 0.55 | 37.0 | 3.80e-01 | 72.7% | 96.4% |
| 3503335 | 604.1.1.124 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_6 | 0.55 | 44.0 | 3.61e-01 | 100.0% | 45.2% |
| 4989822 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.55 | 35.0 | 3.56e-01 | 94.5% | 65.5% |
| 4239731 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.52 | 46.0 | 3.59e-01 | 100.0% | 82.5% |
| 3172821 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.52 | 46.0 | 3.63e-01 | 100.0% | 86.1% |
| 3909150 | 5063.1.1.15 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › OCIA | 0.52 | 44.0 | 4.00e-01 | 100.0% | 70.7% |
| 4987417 | 622.1.1.0 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain | 0.51 | 37.0 | 3.43e-01 | 100.0% | 58.7% |
| 3430353 | 4163.1.2.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like › Sld5 | 0.50 | 38.0 | 2.99e-01 | 83.6% | 92.8% |