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IMGVR_UViG_3300020079_000070-3300020079-Ga0187906_100258014

Arc-Vir

IMGVR_UViG_3300020079_000070-3300020079-Ga0187906_100258014

Quality

91.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-248
PDB
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fdyB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.71 61.0 5.79e-01 97.6% 75.9%
6fnuA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.71 60.0 5.66e-01 89.1% 86.8%
3na8A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.71 61.0 5.78e-01 98.0% 76.6%
4acyA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.70 66.0 5.85e-01 99.6% 98.5%
3ozoA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.70 65.0 5.49e-01 97.6% 88.4%
2fliC00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 59.0 6.23e-01 96.4% 98.6%
1dxeA00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.70 58.0 5.75e-01 85.4% 93.3%
4jhmA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.70 59.0 5.81e-01 95.1% 84.0%
1b5tA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.69 58.0 5.66e-01 88.3% 89.8%
2egzC00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 59.0 6.22e-01 97.6% 99.5%
3s5nA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 60.0 5.62e-01 98.0% 76.3%
1sfjB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 61.0 6.26e-01 96.4% 98.3%
2hk0A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.69 63.0 5.96e-01 97.2% 100.0%
4tv5A00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.68 57.0 5.73e-01 85.8% 93.1%
3sjnA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.68 58.0 5.79e-01 96.4% 86.2%
6jebA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.68 64.0 5.56e-01 98.8% 94.2%
3ciwA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 63.0 5.58e-01 97.6% 81.3%
6yhhA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.68 63.0 5.57e-01 98.0% 91.9%
2ps2A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.68 56.0 5.78e-01 96.4% 89.5%
2gdqA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.68 59.0 5.79e-01 96.4% 85.0%
2wmiA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.68 63.0 5.48e-01 99.2% 85.6%
2lleA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 59.0 6.06e-01 98.0% 96.6%
1qwgA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.66 60.0 6.02e-01 99.2% 94.4%
6zxbA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 29.0 3.93e-01 75.7% 76.9%
2wc7A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.66 60.0 5.14e-01 98.4% 97.2%
4kruA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 49.0 5.24e-01 96.8% 88.8%
3msrA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.65 60.0 5.30e-01 99.6% 82.7%
1g5aA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 60.0 5.12e-01 99.6% 99.7%
1yx1A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.64 59.0 5.91e-01 97.2% 99.2%
1vcvA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 55.0 5.80e-01 94.3% 98.7%
4gxwB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.64 55.0 4.80e-01 91.1% 86.8%
2nlyA00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.64 51.0 5.38e-01 97.2% 94.4%
2wagA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 49.0 5.19e-01 97.2% 89.9%
2cc0A00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.63 44.0 4.93e-01 96.8% 90.1%
3ro6A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.60 51.0 5.16e-01 96.0% 91.3%
3jteA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 30.0 4.04e-01 75.3% 92.1%
3a24A02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 54.0 5.25e-01 98.0% 95.6%
3sy8C02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.59 51.0 5.09e-01 91.1% 93.3%
4dadA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 30.0 4.05e-01 76.9% 93.0%
1nfgA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.58 53.0 4.73e-01 98.4% 87.7%
3pfmA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.57 48.0 4.89e-01 88.3% 91.8%
1srrC00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 29.0 4.02e-01 75.7% 98.3%
2a5hA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 49.0 4.67e-01 96.0% 80.1%
3rf9B02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 49.0 4.69e-01 94.3% 89.2%
5cgaE00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 46.0 4.61e-01 90.7% 99.6%
1c3qA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 46.0 4.45e-01 91.5% 94.4%
3e9kA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.53 36.0 3.56e-01 98.0% 61.5%
3umoA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.53 46.0 4.34e-01 94.7% 87.4%
2f02B00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.52 48.0 4.41e-01 98.4% 87.3%
1ab5A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 28.0 3.75e-01 76.1% 100.0%
2ajrA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.52 47.0 4.65e-01 98.8% 97.4%
2abqA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.52 47.0 4.37e-01 98.0% 88.2%
2x5nA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.51 33.0 3.74e-01 92.3% 86.0%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3946611 2002.1.1.254 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GH5_mannosidase 0.73 68.0 5.88e-01 98.4% 93.8%
4872991 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.72 66.0 6.13e-01 98.0% 90.0%
3388919 2002.1.1.185 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_99 0.70 66.0 5.77e-01 100.0% 93.9%
1401856 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.69 65.0 6.08e-01 100.0% 99.3%
3654895 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.68 57.0 5.37e-01 86.6% 85.9%
4137376 2002.1.1.386 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF25838 0.68 63.0 5.73e-01 98.4% 90.5%
3071005 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.67 53.0 5.55e-01 81.4% 96.4%
5001042 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.66 61.0 5.78e-01 98.4% 94.6%
4994125 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.66 61.0 5.98e-01 97.6% 99.6%
3696439 2002.1.1.100 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ComA 0.66 61.0 5.88e-01 98.8% 90.9%
4945991 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.65 60.0 5.96e-01 98.0% 93.8%
5028367 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.65 60.0 5.80e-01 97.6% 98.5%
5070822 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.65 58.0 5.72e-01 94.7% 99.2%
4972192 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.65 61.0 5.73e-01 100.0% 97.3%
4932365 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.65 59.0 5.51e-01 96.0% 99.0%
4961012 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.65 59.0 5.92e-01 97.6% 99.2%
3967116 2002.1.1.222 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF934 0.64 41.0 4.96e-01 99.2% 96.9%
4302494 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.64 59.0 5.77e-01 98.4% 89.6%
5083338 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.64 59.0 5.53e-01 98.4% 92.2%
989855 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.64 55.0 4.80e-01 91.1% 86.8%
4982468 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.64 59.0 5.69e-01 98.8% 99.3%
4935059 2002.1.1.44 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase 0.64 58.0 5.75e-01 98.0% 94.5%
3638250 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.63 60.0 5.69e-01 100.0% 88.4%
4934700 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.63 52.0 5.27e-01 87.0% 94.8%
2755272 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.61 53.0 4.65e-01 90.7% 83.1%
4974753 2002.1.1.10 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS 0.61 50.0 4.90e-01 84.2% 82.2%
3659127 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.61 55.0 4.88e-01 98.0% 85.4%
3993420 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.60 54.0 5.00e-01 96.0% 98.1%
3283326 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.60 55.0 4.91e-01 98.8% 94.7%
4928063 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.60 53.0 5.38e-01 93.9% 98.8%
4928830 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.60 32.0 4.27e-01 86.2% 96.9%
5078311 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.59 54.0 4.96e-01 98.4% 91.7%
3990702 2002.1.1.33 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_20 0.59 55.0 4.95e-01 98.8% 87.9%
4642902 2004.1.1.563 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1, PduV-EutP 0.58 34.0 4.09e-01 94.7% 84.8%
5024105 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.58 47.0 5.02e-01 86.6% 97.3%
5022956 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.58 45.0 4.76e-01 91.5% 91.2%
4903210 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.57 49.0 5.03e-01 91.9% 94.2%
None 0.56 29.0 3.67e-01 84.6% 80.5%
4336279 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.55 29.0 3.64e-01 75.7% 82.8%
None 0.55 41.0 3.67e-01 76.5% 86.4%
3772241 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.54 44.0 4.73e-01 89.1% 98.1%
4066512 2003.1.6.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like 0.54 41.0 3.65e-01 76.9% 85.4%
3975431 2007.1.3.41 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PF30372 0.54 27.0 3.59e-01 76.9% 85.9%
3968444 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.53 30.0 3.94e-01 87.9% 100.0%
3599511 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.53 37.0 3.71e-01 99.2% 67.8%
3969646 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.52 47.0 4.37e-01 96.8% 87.1%
9522 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.52 48.0 4.39e-01 98.8% 87.5%
3385824 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.51 25.0 3.45e-01 82.6% 91.7%
164102 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.51 46.0 4.25e-01 98.0% 85.2%
5064590 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.51 44.0 4.16e-01 93.5% 99.3%