←Back to structures
IMGVR_UViG_3300020083_001453-3300020083-Ga0194111_1000349312
Arc-VirIMGVR_UViG_3300020083_001453-3300020083-Ga0194111_1000349312
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-73
Domain cluster:
rep: SR-VP_4-6_scaffold_141_5680703_prodigal-single.1__X__X__00441__D7-74
D2
high
residues 81-185
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8b2sA01 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.58 | 41.0 | 3.65e-01 | 73.3% | 64.9% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.56 | 43.0 | 4.68e-01 | 84.8% | 98.8% |
| 1ac1A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 41.0 | 3.49e-01 | 80.0% | 72.3% |
| 3hdeC00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.53 | 43.0 | 3.80e-01 | 89.5% | 96.3% |
| 4dwlA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.53 | 35.0 | 3.52e-01 | 89.5% | 64.8% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 30.0 | 3.14e-01 | 82.9% | 60.4% |
| 3di5A00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.51 | 42.0 | 3.80e-01 | 91.4% | 82.6% |
| 1fkmA02 | 1.10.472.80 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 | 0.50 | 39.0 | 3.72e-01 | 85.7% | 95.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4093848 | 3584.1.1.1 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger | 0.85 | 81.0 | 6.24e-01 | 100.0% | 89.5% |
| 4522025 | 3584.1.1.1 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger | 0.82 | 77.0 | 5.98e-01 | 100.0% | 90.0% |
| 4257959 | 3584.1.1.1 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger | 0.82 | 76.0 | 6.14e-01 | 100.0% | 95.3% |
| 3732455 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.62 | 44.0 | 2.88e-01 | 74.3% | 36.7% |
| 3627490 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.55 | 43.0 | 4.29e-01 | 83.8% | 80.9% |
| 3570683 | 108.1.1.88 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › NUCB1_N | 0.54 | 36.0 | 3.46e-01 | 82.9% | 58.3% |
| 4848448 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 37.0 | 4.13e-01 | 90.5% | 93.7% |
| 3285827 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.54 | 46.0 | 3.12e-01 | 99.0% | 67.3% |
| 4947238 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.54 | 44.0 | 3.73e-01 | 89.5% | 72.2% |
| 3833511 | 108.1.1.30 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_8 | 0.54 | 33.0 | 3.23e-01 | 79.0% | 55.7% |
| 3928645 | 101.1.1.222 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Hrp3 | 0.52 | 45.0 | 4.31e-01 | 96.2% | 90.0% |
| 3194922 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.51 | 40.0 | 3.57e-01 | 87.6% | 98.1% |