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IMGVR_UViG_3300020185_000107-3300020185-Ga0206131_1000086929
Arc-VirIMGVR_UViG_3300020185_000107-3300020185-Ga0206131_1000086929
Identity
- Kingdom:
- archaea
Quality
75.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-54
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sqpF00 | 1.10.1090.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain F › Cytochrome b-c1 complex subunit 7 | 0.86 | 59.0 | 4.56e-01 | 71.2% | 35.2% |
| 2vx2G02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.58 | 46.0 | 4.55e-01 | 86.5% | 96.4% |
| 2g80A02 | 1.10.720.60 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.57 | 47.0 | 4.14e-01 | 92.3% | 93.6% |
| 3g3tA00 | 3.20.100.30 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain | 0.54 | 48.0 | 3.01e-01 | 98.1% | 30.7% |
| 2fnaA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.52 | 43.0 | 3.78e-01 | 90.4% | 85.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4852871 | 5070.1.1.1 ↗ | alpha arrays › 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › UCR_14kD | 0.86 | 60.0 | 4.67e-01 | 71.2% | 37.8% |
| 3703616 | 245.2.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB | 0.74 | 61.0 | 5.28e-01 | 96.2% | 58.7% |
| 3838730 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.72 | 49.0 | 3.38e-01 | 75.0% | 21.1% |
| 3941721 | 635.1.1.1 ↗ | alpha arrays › YgfB-like › YgfB-like › YgfB-like › UPF0149 | 0.69 | 56.0 | 3.90e-01 | 90.4% | 45.3% |
| 4970674 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.64 | 49.0 | 4.78e-01 | 100.0% | 75.0% |
| 3941921 | 3317.1.1.0 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain | 0.58 | 40.0 | 4.00e-01 | 78.8% | 69.1% |
| 4080481 | 219.1.1.116 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF28452 | 0.52 | 38.0 | 2.61e-01 | 82.7% | 27.0% |