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IMGVR_UViG_3300020245_000044-3300020245-Ga0211711_100025716
Arc-VirIMGVR_UViG_3300020245_000044-3300020245-Ga0211711_100025716
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-56
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pohA02 | 6.10.140.940 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 45.0 | 3.95e-01 | 100.0% | 50.6% |
| 4qicC01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.52 | 40.0 | 2.99e-01 | 81.5% | 64.8% |
| 1szhA02 | 1.10.150.370 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Caenorhabditis elegans Her-1, C-terminal domain | 0.51 | 37.0 | 3.23e-01 | 77.8% | 69.5% |
| 7zs9401 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.50 | 39.0 | 2.69e-01 | 90.7% | 73.1% |
| 5aq1A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.50 | 37.0 | 2.43e-01 | 83.3% | 65.9% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3577530 | 2007.2.3.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Myotub-related | 0.56 | 45.0 | 2.99e-01 | 90.7% | 20.4% |
| 4990517 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.52 | 44.0 | 2.90e-01 | 94.4% | 58.7% |
D2
medium
residues 77-172
Domain cluster:
rep: IMGVR_UViG_3300009688_000628-3300009688-Ga0116176_100039164__D9-100
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05766.19 best | NinG | 59.9 | 4.40e-16 | 100.0% | 43.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3976723 | 378.1.1.28 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG | 0.91 | 77.0 | 6.93e-01 | 100.0% | 68.0% |
| 3944337 | 378.1.1.28 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG | 0.88 | 80.0 | 6.94e-01 | 100.0% | 67.4% |
| 3894271 | 377.9.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-HIT | 0.59 | 26.0 | 3.41e-01 | 88.5% | 74.0% |
| 295484 | 375.1.1.145 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › FdhE_C | 0.54 | 34.0 | 3.59e-01 | 91.7% | 71.3% |