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IMGVR_UViG_3300020245_000044-3300020245-Ga0211711_100025716

Arc-Vir

IMGVR_UViG_3300020245_000044-3300020245-Ga0211711_100025716

Quality

86.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-56
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pohA02 6.10.140.940 Special › Helix non-globular › Helix Hairpins › 0.65 45.0 3.95e-01 100.0% 50.6%
4qicC01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.52 40.0 2.99e-01 81.5% 64.8%
1szhA02 1.10.150.370 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Caenorhabditis elegans Her-1, C-terminal domain 0.51 37.0 3.23e-01 77.8% 69.5%
7zs9401 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.50 39.0 2.69e-01 90.7% 73.1%
5aq1A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 37.0 2.43e-01 83.3% 65.9%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3577530 2007.2.3.7 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Myotub-related 0.56 45.0 2.99e-01 90.7% 20.4%
4990517 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.52 44.0 2.90e-01 94.4% 58.7%
D2 medium residues 77-172
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05766.19 best NinG 59.9 4.40e-16 100.0% 43.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3976723 378.1.1.28 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG 0.91 77.0 6.93e-01 100.0% 68.0%
3944337 378.1.1.28 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG 0.88 80.0 6.94e-01 100.0% 67.4%
3894271 377.9.1.2 few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-HIT 0.59 26.0 3.41e-01 88.5% 74.0%
295484 375.1.1.145 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › FdhE_C 0.54 34.0 3.59e-01 91.7% 71.3%