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IMGVR_UViG_3300020255_000249-3300020255-Ga0211586_10021266
Arc-VirIMGVR_UViG_3300020255_000249-3300020255-Ga0211586_10021266
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-54_83-170_280-303
Domain cluster:
rep: MN013189.1__QDB71409.1__Mic1_40__00040__D3-40_71-162_292-325
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a7mA01 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.52 | 27.0 | 3.28e-01 | 70.1% | 74.5% |
D2
medium
residues 171-279_304-326
Domain cluster:
rep: IMGVR_UViG_3300045988_180044-3300045988-Ga0495776_185241_19297_20526__D170-267_306-316
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ohgA02 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.69 | 52.0 | 5.83e-01 | 96.2% | 99.0% |
| 1yueA03 | 3.30.2320.40 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › | 0.66 | 56.0 | 5.86e-01 | 95.5% | 97.5% |
| 2h8lA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 34.0 | 3.61e-01 | 73.5% | 66.4% |
| 3ec3A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 32.0 | 3.50e-01 | 73.5% | 66.1% |
| 3gl3D00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 37.0 | 3.69e-01 | 94.7% | 68.6% |
| 3hdcA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 36.0 | 3.71e-01 | 95.5% | 71.9% |
| 1z5yE00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 36.0 | 3.60e-01 | 93.9% | 66.9% |
| 3sigA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.51 | 45.0 | 3.60e-01 | 97.0% | 73.6% |
| 6izhE00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.51 | 38.0 | 3.94e-01 | 78.8% | 95.9% |
| 1pf5A00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.51 | 38.0 | 3.89e-01 | 80.3% | 95.4% |
| 2xr1B04 | 3.40.50.10890 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 42.0 | 3.84e-01 | 90.9% | 100.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3110786 | 2485.3.1.14 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp10A-like | 0.74 | 69.0 | 5.00e-01 | 100.0% | 55.8% |
| 2968064 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.72 | 67.0 | 4.83e-01 | 100.0% | 54.3% |
| 2989356 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.72 | 65.0 | 4.92e-01 | 97.0% | 54.1% |
| 2989363 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.71 | 66.0 | 4.93e-01 | 99.2% | 84.7% |
| 5083777 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.69 | 64.0 | 4.84e-01 | 99.2% | 80.7% |
| 2989340 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.69 | 62.0 | 4.60e-01 | 96.2% | 54.9% |
| 2989372 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.68 | 62.0 | 4.62e-01 | 97.0% | 52.3% |
| 2989506 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.67 | 61.0 | 4.59e-01 | 97.0% | 58.3% |
| 1104137 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.59 | 28.0 | 3.72e-01 | 97.0% | 88.7% |
| 4928992 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.52 | 36.0 | 3.63e-01 | 93.9% | 68.3% |
| 3838532 | 327.9.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Probable GTPase Der, C-terminal domain › Probable GTPase Der, C-terminal domain | 0.51 | 36.0 | 2.53e-01 | 72.0% | 56.4% |