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IMGVR_UViG_3300020264_000538-3300020264-Ga0211526_10011543
Arc-VirIMGVR_UViG_3300020264_000538-3300020264-Ga0211526_10011543
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-45_134-151
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a52A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.54 | 47.0 | 3.22e-01 | 100.0% | 81.6% |
| 3uceA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 45.0 | 3.12e-01 | 100.0% | 64.4% |
| 1vquA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.50 | 37.0 | 3.65e-01 | 100.0% | 76.1% |
D2
medium
residues 46-133_152-169
Domain cluster:
rep: OQ508957.1__WGH49903.1__X__00187__D10-156
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26869.1 best | Phage_T4_gp2 | 31.6 | 1.30e-07 | 96.2% | 25.5% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.73 | 34.0 | 4.63e-01 | 80.2% | 87.0% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.71 | 33.0 | 4.65e-01 | 83.0% | 95.8% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.71 | 33.0 | 4.57e-01 | 83.0% | 90.4% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 34.0 | 4.06e-01 | 83.0% | 67.1% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 39.0 | 4.46e-01 | 81.1% | 74.7% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 36.0 | 4.70e-01 | 80.2% | 93.2% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.68 | 31.0 | 4.43e-01 | 78.3% | 97.8% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 36.0 | 4.49e-01 | 81.1% | 89.1% |
| 4iimA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 34.0 | 4.41e-01 | 80.2% | 93.0% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 34.0 | 4.12e-01 | 79.2% | 86.8% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 37.0 | 3.94e-01 | 91.5% | 76.7% |
| 2ew0A00 | 3.40.1740.10 | Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like | 0.55 | 43.0 | 3.69e-01 | 83.0% | 80.6% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 34.0 | 3.54e-01 | 84.9% | 67.7% |
| 3hl8A02 | 3.30.1520.20 | Alpha Beta › 2-Layer Sandwich › PX Domain › Exonuclease ExoI, domain 2 | 0.52 | 43.0 | 4.02e-01 | 93.4% | 76.9% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3281945 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.73 | 44.0 | 4.72e-01 | 83.0% | 70.0% |
| 3231154 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 39.0 | 4.38e-01 | 82.1% | 68.8% |
| 4027422 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.70 | 34.0 | 4.57e-01 | 83.0% | 89.1% |
| 3900236 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 36.0 | 4.65e-01 | 79.2% | 91.7% |
| 3905176 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.67 | 37.0 | 4.54e-01 | 82.1% | 87.7% |
| 3217772 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 39.0 | 4.30e-01 | 84.0% | 72.9% |
| 3623786 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.65 | 35.0 | 4.28e-01 | 81.1% | 83.1% |
| 3588727 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 38.0 | 4.53e-01 | 83.0% | 87.1% |
| 3240651 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.65 | 35.0 | 3.94e-01 | 81.1% | 68.8% |
| 5039349 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 35.0 | 4.50e-01 | 81.1% | 96.7% |
| 158943 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.63 | 36.0 | 4.07e-01 | 81.1% | 74.7% |
| 3357709 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 39.0 | 4.30e-01 | 83.0% | 78.8% |
| 4210485 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.61 | 33.0 | 3.98e-01 | 83.0% | 83.1% |
| 4024240 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 36.0 | 4.11e-01 | 83.0% | 78.8% |
| 4680746 | 4.1.1.52 ↗ | beta barrels › SH3 › SH3 › SH3 › ZapC_C | 0.60 | 34.0 | 3.93e-01 | 83.0% | 78.7% |
| 3834112 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.58 | 40.0 | 4.54e-01 | 83.0% | 93.8% |
| 4217839 | 4113.1.1.1 ↗ | beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 | 0.58 | 45.0 | 3.80e-01 | 83.0% | 78.9% |
| 4598958 | 4113.1.1.0 ↗ | beta barrels › VC0467-like › VC0467-like › VC0467-like | 0.57 | 44.0 | 3.74e-01 | 83.0% | 77.8% |
| 4518697 | 4113.1.1.1 ↗ | beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 | 0.57 | 44.0 | 3.67e-01 | 83.0% | 78.9% |
| 3719783 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 38.0 | 3.99e-01 | 83.0% | 78.7% |
| 2725406 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.52 | 37.0 | 4.11e-01 | 98.1% | 95.1% |