Back to structures

IMGVR_UViG_3300020295_000083-3300020295-Ga0211530_100104515

Arc-Vir

IMGVR_UViG_3300020295_000083-3300020295-Ga0211530_100104515

Quality

77.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-57
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1whrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.58 39.0 2.96e-01 70.8% 33.9%
4bwxA03 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 49.0 4.07e-01 95.8% 77.5%
2w4sA00 1.10.10.1440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PHAX RNA-binding domain 0.52 39.0 3.38e-01 87.5% 52.3%
4rcnA04 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.50 36.0 2.36e-01 79.2% 83.8%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4314819 2004.1.1.58 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase 0.63 44.0 2.91e-01 72.9% 97.9%
3563573 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.61 40.0 3.56e-01 70.8% 61.3%
3979567 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.58 41.0 3.37e-01 75.0% 62.2%
3607508 226.1.1.4 a+b two layers › POZ domain › POZ domain › POZ domain › BTB_2 0.50 36.0 2.92e-01 77.1% 87.4%