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IMGVR_UViG_3300020360_000190-3300020360-Ga0211712_100022132
Arc-VirIMGVR_UViG_3300020360_000190-3300020360-Ga0211712_100022132
Identity
- Kingdom:
- archaea
Quality
79.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 48-102
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 44.0 | 3.94e-01 | 98.2% | 44.7% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.65 | 42.0 | 3.13e-01 | 100.0% | 25.3% |
| 3f1tB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.63 | 42.0 | 3.14e-01 | 100.0% | 27.9% |
| 2hngA00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.62 | 47.0 | 3.66e-01 | 100.0% | 36.8% |
| 2xn2A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 55.0 | 4.52e-01 | 100.0% | 84.4% |
| 4kz1A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.60 | 42.0 | 3.23e-01 | 100.0% | 30.4% |
| 4ibnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.60 | 46.0 | 3.21e-01 | 100.0% | 25.0% |
| 3er7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 42.0 | 3.30e-01 | 98.2% | 33.3% |
| 5i97C00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.59 | 43.0 | 3.31e-01 | 100.0% | 32.1% |
| 3bvxA05 | 2.60.40.1360 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 52.0 | 4.33e-01 | 100.0% | 91.7% |
| 1gmeA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 47.0 | 3.49e-01 | 100.0% | 33.3% |
| 1n7vA02 | 2.60.330.10 | Mainly Beta › Sandwich › receptor-binding protein prd1-p2, domain 2 › receptor-binding protein prd1-p2, domain 2 | 0.58 | 41.0 | 3.16e-01 | 96.4% | 33.3% |
| 1shsA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 44.0 | 3.64e-01 | 100.0% | 43.5% |
| 3robA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 41.0 | 3.24e-01 | 96.4% | 33.6% |
| 3pg6B00 | 3.30.390.130 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.56 | 49.0 | 3.72e-01 | 100.0% | 82.1% |
| 2r39A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 50.0 | 3.96e-01 | 100.0% | 64.2% |
| 2q0zX03 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.55 | 49.0 | 3.84e-01 | 100.0% | 68.7% |
| 4n4rB00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.55 | 45.0 | 3.29e-01 | 100.0% | 33.1% |
| 2lg7A00 | 2.60.60.50 | Mainly Beta › Sandwich › Lipoxygenase-1 › | 0.55 | 49.0 | 3.72e-01 | 100.0% | 79.1% |
| 3kmhA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 46.0 | 3.14e-01 | 100.0% | 58.3% |
| 3bioA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 45.0 | 3.68e-01 | 100.0% | 99.1% |
| 6a5gA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 42.0 | 3.24e-01 | 98.2% | 36.0% |
| 3qw9B00 | 2.60.40.4100 | Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain | 0.53 | 47.0 | 3.35e-01 | 100.0% | 60.8% |
| 6hswA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 45.0 | 2.71e-01 | 100.0% | 24.2% |
| 2jxpA01 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.53 | 45.0 | 3.35e-01 | 100.0% | 37.6% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 46.0 | 3.79e-01 | 100.0% | 68.0% |
| 1uliB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 37.0 | 2.77e-01 | 96.4% | 25.4% |
| 3es6B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 44.0 | 3.50e-01 | 100.0% | 65.3% |
| 5optY00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 44.0 | 3.47e-01 | 100.0% | 69.1% |
| 3ub1A01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 43.0 | 3.29e-01 | 100.0% | 39.7% |
| 3ff0A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 37.0 | 2.91e-01 | 100.0% | 32.6% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.50 | 39.0 | 3.06e-01 | 96.4% | 40.4% |
| 1hxmB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 43.0 | 3.54e-01 | 100.0% | 63.8% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3268595 | 230.1.1.1 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › Uricase | 0.63 | 55.0 | 4.11e-01 | 100.0% | 76.4% |
| 3269734 | 11.1.5.62 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM49 | 0.60 | 51.0 | 4.08e-01 | 100.0% | 92.5% |
| 3173251 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.60 | 51.0 | 3.69e-01 | 100.0% | 32.4% |
| 3394080 | 12.1.1.40 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyc_hyd_38C_2 | 0.59 | 52.0 | 4.39e-01 | 100.0% | 94.6% |
| 3883228 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 51.0 | 4.12e-01 | 100.0% | 72.7% |
| 3594422 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.58 | 49.0 | 3.39e-01 | 98.2% | 29.1% |
| 4962569 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.57 | 44.0 | 3.33e-01 | 100.0% | 33.1% |
| 4022303 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.57 | 47.0 | 3.51e-01 | 100.0% | 34.7% |
| 3169657 | 4099.1.1.47 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF30282 | 0.57 | 50.0 | 3.93e-01 | 100.0% | 67.8% |
| 4146401 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.56 | 45.0 | 3.33e-01 | 96.4% | 33.8% |
| 3611624 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 46.0 | 3.53e-01 | 96.4% | 72.6% |
| 3872149 | 11.1.1.74 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › SVA | 0.55 | 48.0 | 3.77e-01 | 100.0% | 59.2% |
| 3474270 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 47.0 | 3.54e-01 | 100.0% | 73.1% |
| 3207181 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.55 | 44.0 | 3.88e-01 | 98.2% | 58.9% |
| 3956463 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.54 | 46.0 | 3.00e-01 | 96.4% | 81.6% |
| 3727259 | 246.3.1.4 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 | 0.54 | 48.0 | 2.91e-01 | 100.0% | 16.1% |
| 3900258 | 3169.1.1.1 ↗ | a+b two layers › Carboxyl terminal domain of human deltex 3-like › Carboxyl terminal domain of human deltex 3-like › Carboxyl terminal domain of human deltex 3-like › DTC | 0.54 | 46.0 | 3.60e-01 | 100.0% | 43.0% |
| 3277040 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.54 | 47.0 | 3.74e-01 | 100.0% | 92.1% |
| 4388709 | 4.1.1.346 ↗ | beta barrels › SH3 › SH3 › SH3 › FlgH | 0.53 | 48.0 | 4.57e-01 | 100.0% | 84.6% |
| 3486913 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 46.0 | 3.56e-01 | 100.0% | 75.2% |
| 3645656 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.53 | 40.0 | 3.58e-01 | 100.0% | 57.5% |
| 3258875 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 45.0 | 3.36e-01 | 100.0% | 58.0% |
| 4101594 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.52 | 43.0 | 3.51e-01 | 100.0% | 79.2% |
| 3489635 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.52 | 45.0 | 3.27e-01 | 100.0% | 46.7% |
| 3463871 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 45.0 | 3.24e-01 | 100.0% | 63.0% |
| 3444630 | 11.2.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 | 0.51 | 44.0 | 3.28e-01 | 100.0% | 58.8% |
| 3028551 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.51 | 42.0 | 3.09e-01 | 100.0% | 52.3% |
| 4976732 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.51 | 42.0 | 2.61e-01 | 100.0% | 15.1% |
| 3364483 | 9.2.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF2921_N | 0.51 | 44.0 | 3.09e-01 | 100.0% | 34.4% |
| 3806458 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.51 | 44.0 | 3.24e-01 | 100.0% | 36.6% |
| 4236774 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.50 | 41.0 | 3.33e-01 | 100.0% | 78.4% |
| 3887250 | 11.1.1.640 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N | 0.50 | 43.0 | 3.53e-01 | 98.2% | 55.2% |
| 3899293 | 11.1.1.640 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N | 0.50 | 42.0 | 3.41e-01 | 94.5% | 49.5% |
D2
medium
residues 103-177
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3byqA00 | 3.30.1330.110 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › BB2672 | 0.61 | 42.0 | 3.17e-01 | 70.7% | 87.4% |
| 2n8xA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.57 | 46.0 | 3.54e-01 | 88.0% | 67.5% |
| 6hmjA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 32.0 | 2.92e-01 | 84.0% | 39.0% |
| 7f79A01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.55 | 41.0 | 3.23e-01 | 81.3% | 71.1% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.54 | 40.0 | 3.45e-01 | 88.0% | 48.8% |
| 3icyA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 32.0 | 2.76e-01 | 82.7% | 37.3% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.54 | 37.0 | 3.08e-01 | 80.0% | 39.7% |
| 3ua0A00 | 6.20.280.10 | Special › Other non-globular › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.53 | 38.0 | 3.79e-01 | 80.0% | 72.2% |
| 3gd6A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 37.0 | 3.08e-01 | 76.0% | 76.1% |
| 1ae2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 37.0 | 3.59e-01 | 76.0% | 94.2% |
| 2r78C00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 30.0 | 2.61e-01 | 84.0% | 37.1% |
| 2wraA00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.51 | 39.0 | 3.32e-01 | 81.3% | 95.1% |
| 4gn2A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 44.0 | 3.16e-01 | 100.0% | 83.3% |
| 3f14A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 40.0 | 3.47e-01 | 85.3% | 100.0% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3604329 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 48.0 | 3.64e-01 | 85.3% | 86.0% |
| 5002153 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.62 | 42.0 | 3.82e-01 | 70.7% | 58.0% |
| 1086995 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.60 | 40.0 | 4.67e-01 | 84.0% | 100.0% |
| 3784480 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.60 | 43.0 | 3.01e-01 | 76.0% | 97.6% |
| 3777916 | 4956.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.58 | 42.0 | 3.08e-01 | 76.0% | 98.1% |
| 3596066 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 33.0 | 2.81e-01 | 70.7% | 32.8% |
| 3852546 | 4954.1.1.0 ↗ | a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit | 0.58 | 41.0 | 3.14e-01 | 76.0% | 98.4% |
| 3890886 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 41.0 | 4.09e-01 | 82.7% | 71.2% |
| 3991948 | 2007.1.6.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › ELFV_dehydrog_N | 0.56 | 42.0 | 3.16e-01 | 81.3% | 60.0% |
| 3601106 | 2007.1.6.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain | 0.56 | 41.0 | 3.08e-01 | 80.0% | 59.0% |
| 4945867 | 2007.1.6.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › ELFV_dehydrog_N | 0.56 | 41.0 | 3.11e-01 | 80.0% | 60.5% |
| 3976849 | 2007.1.6.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › ELFV_dehydrog_N | 0.56 | 41.0 | 3.12e-01 | 80.0% | 60.5% |
| 3795168 | 2007.1.6.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › ELFV_dehydrog_N | 0.56 | 42.0 | 3.01e-01 | 81.3% | 52.2% |
| 4989769 | 2007.1.6.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › ELFV_dehydrog_N | 0.56 | 41.0 | 3.21e-01 | 80.0% | 67.4% |
| 4997159 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.56 | 33.0 | 2.72e-01 | 82.7% | 30.3% |
| 4960416 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 40.0 | 3.82e-01 | 77.3% | 100.0% |
| 4979276 | 2007.1.6.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain | 0.55 | 41.0 | 3.14e-01 | 80.0% | 63.8% |
| 5035440 | 244.2.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim | 0.55 | 39.0 | 3.25e-01 | 82.7% | 42.2% |
| 3738330 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.54 | 42.0 | 3.48e-01 | 85.3% | 55.0% |
| 5017798 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.54 | 33.0 | 2.82e-01 | 84.0% | 36.8% |
| 3438528 | 5.1.4.506 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_AT5G49610-like | 0.54 | 43.0 | 2.78e-01 | 85.3% | 23.5% |
| 3276558 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.54 | 43.0 | 2.86e-01 | 88.0% | 84.9% |
| 4984611 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.53 | 41.0 | 3.07e-01 | 86.7% | 77.9% |
| 4559431 | 331.22.1.2 ↗ | a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 | 0.53 | 44.0 | 3.22e-01 | 93.3% | 41.8% |
| 3411570 | 2007.2.3.24 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PF27561 | 0.53 | 45.0 | 2.88e-01 | 97.3% | 67.5% |
| 3638931 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.53 | 40.0 | 2.93e-01 | 85.3% | 99.1% |
| 5041395 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.52 | 37.0 | 3.21e-01 | 74.7% | 72.5% |
| 3608162 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.51 | 42.0 | 3.34e-01 | 93.3% | 66.1% |
| 3703231 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.51 | 42.0 | 3.32e-01 | 92.0% | 65.5% |
| 4963860 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.51 | 30.0 | 2.66e-01 | 82.7% | 38.3% |
| 3758249 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.51 | 30.0 | 2.46e-01 | 82.7% | 29.0% |
| 4964487 | 218.1.1.12 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › PF26684 | 0.51 | 37.0 | 3.28e-01 | 77.3% | 93.6% |
| 4438762 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.51 | 35.0 | 3.43e-01 | 74.7% | 64.7% |
| 3554664 | 11.1.1.206 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL17R_fnIII_D1 | 0.51 | 37.0 | 2.98e-01 | 78.7% | 62.5% |
| 3925367 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 37.0 | 2.96e-01 | 77.3% | 38.7% |
| 3425057 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.50 | 39.0 | 3.56e-01 | 84.0% | 72.0% |
| 5019127 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.50 | 31.0 | 1.98e-01 | 84.0% | 11.4% |
D3
medium
residues 393-501
Domain cluster:
rep: IMGVR_UViG_3300012954_004327-3300012954-Ga0163111_100097723__D410-486
D4
medium
residues 502-653
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.57 | 35.0 | 3.40e-01 | 100.0% | 53.8% |
| 4gf4A00 | 2.40.160.180 | Mainly Beta › Beta Barrel › Porin › Carbohydrate-selective porin OprB | 0.57 | 43.0 | 3.39e-01 | 96.1% | 39.5% |
| 3ua0A00 | 6.20.280.10 | Special › Other non-globular › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.56 | 29.0 | 4.00e-01 | 89.5% | 98.7% |
| 4dokA01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.56 | 39.0 | 3.87e-01 | 70.4% | 91.0% |
| 4r7kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 32.0 | 3.15e-01 | 88.8% | 57.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028168 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.62 | 42.0 | 3.42e-01 | 94.1% | 36.7% |
| 4515973 | 5084.5.1.32 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › LOC400499 | 0.56 | 48.0 | 3.27e-01 | 92.8% | 26.5% |
| 3276558 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.56 | 41.0 | 3.25e-01 | 76.3% | 70.4% |
| 3824851 | 5084.5.1.43 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF30985 | 0.53 | 40.0 | 3.89e-01 | 95.4% | 70.3% |