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IMGVR_UViG_3300020361_000004-3300020361-Ga0211531_10011437
Arc-VirIMGVR_UViG_3300020361_000004-3300020361-Ga0211531_10011437
Identity
- Kingdom:
- archaea
Quality
71.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-55
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.79 | 56.0 | 5.73e-01 | 100.0% | 79.6% |
| 4tpuA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.74 | 48.0 | 5.49e-01 | 100.0% | 94.6% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.70 | 50.0 | 5.13e-01 | 100.0% | 80.0% |
| 4me3A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.69 | 54.0 | 5.33e-01 | 100.0% | 81.8% |
| 2k2dA00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.66 | 43.0 | 4.48e-01 | 100.0% | 74.5% |
| 2cklA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 47.0 | 3.86e-01 | 100.0% | 48.0% |
| 6nw1A00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.58 | 45.0 | 4.78e-01 | 100.0% | 100.0% |
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 44.0 | 4.24e-01 | 100.0% | 72.9% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.56 | 44.0 | 3.95e-01 | 96.2% | 95.2% |
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.56 | 43.0 | 4.49e-01 | 100.0% | 97.9% |
| 3q7yA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 46.0 | 3.63e-01 | 100.0% | 97.6% |
| 5trbA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 43.0 | 3.95e-01 | 100.0% | 65.2% |
| 2ma6A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 40.0 | 3.86e-01 | 100.0% | 68.9% |
| 4mbsA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 47.0 | 2.84e-01 | 100.0% | 15.0% |
| 2zt5A02 | 3.30.40.230 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.53 | 45.0 | 3.91e-01 | 100.0% | 91.7% |
| 3dadA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.53 | 43.0 | 2.74e-01 | 100.0% | 28.4% |
| 2jqzA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 44.0 | 3.38e-01 | 100.0% | 98.5% |
| 5ejrA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 43.0 | 3.78e-01 | 98.1% | 96.5% |
| 5hkxA04 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 39.0 | 4.20e-01 | 100.0% | 97.7% |
| 2c7hA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 43.0 | 3.77e-01 | 100.0% | 80.2% |
| 1m0wB05 | 3.30.1490.50 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Glutathione synthase lid domain | 0.52 | 35.0 | 3.37e-01 | 100.0% | 61.7% |
| 2ms3A00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.50 | 42.0 | 4.15e-01 | 100.0% | 91.2% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3278973 | 375.1.1.185 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 | 0.82 | 57.0 | 6.45e-01 | 100.0% | 95.0% |
| 3277720 | 375.1.1.185 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 | 0.80 | 54.0 | 6.11e-01 | 100.0% | 92.5% |
| 5015962 | 375.1.1.64 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RUBY_RBDX | 0.75 | 50.0 | 5.13e-01 | 100.0% | 72.0% |
| 4953501 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 50.0 | 5.50e-01 | 100.0% | 90.0% |
| 4993851 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 53.0 | 5.60e-01 | 100.0% | 86.7% |
| 3588629 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 54.0 | 5.86e-01 | 100.0% | 93.0% |
| 4933103 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.74 | 57.0 | 5.49e-01 | 100.0% | 73.3% |
| 4960524 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 51.0 | 5.47e-01 | 100.0% | 86.7% |
| 4190103 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.71 | 47.0 | 5.33e-01 | 100.0% | 94.7% |
| 4666101 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 45.0 | 4.79e-01 | 100.0% | 75.6% |
| 3504586 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.70 | 50.0 | 3.59e-01 | 100.0% | 25.8% |
| None | — | 0.70 | 43.0 | 4.61e-01 | 100.0% | 73.3% | |
| 4990345 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 54.0 | 5.53e-01 | 100.0% | 88.0% |
| 5066701 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 49.0 | 5.32e-01 | 100.0% | 97.5% |
| 3441684 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.69 | 52.0 | 5.16e-01 | 100.0% | 78.2% |
| 3388528 | 7056.1.1.0 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan | 0.69 | 46.0 | 5.05e-01 | 100.0% | 90.0% |
| 4990489 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 54.0 | 5.49e-01 | 100.0% | 88.0% |
| 5068907 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 48.0 | 5.17e-01 | 98.1% | 86.7% |
| 4026823 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 49.0 | 5.23e-01 | 98.1% | 90.9% |
| 4021767 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.67 | 45.0 | 5.01e-01 | 100.0% | 92.5% |
| 3896840 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.67 | 45.0 | 4.94e-01 | 100.0% | 92.5% |
| 4334910 | 101.1.1.107 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF134 | 0.65 | 44.0 | 3.32e-01 | 100.0% | 29.6% |
| 3940425 | 375.1.1.128 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_SprT | 0.65 | 44.0 | 4.77e-01 | 100.0% | 92.5% |
| 4979507 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.65 | 50.0 | 3.63e-01 | 100.0% | 30.2% |
| 4028011 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 46.0 | 4.87e-01 | 100.0% | 91.1% |
| 3352699 | 375.1.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin | 0.63 | 46.0 | 4.69e-01 | 100.0% | 82.0% |
| 3415761 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.63 | 43.0 | 4.35e-01 | 100.0% | 74.0% |
| 3401929 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 45.0 | 5.02e-01 | 100.0% | 100.0% |
| 3469808 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 54.0 | 5.23e-01 | 100.0% | 86.7% |
| 3598330 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 46.0 | 3.26e-01 | 100.0% | 26.2% |
| 3663415 | 375.1.1.64 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RUBY_RBDX | 0.62 | 46.0 | 4.42e-01 | 100.0% | 70.0% |
| 3622513 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 52.0 | 5.03e-01 | 100.0% | 91.7% |
| 3725441 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 53.0 | 5.08e-01 | 100.0% | 86.7% |
| 3872182 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.59 | 50.0 | 4.73e-01 | 100.0% | 95.4% |
| 3586230 | 386.1.1.350 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29157 | 0.58 | 51.0 | 3.10e-01 | 100.0% | 15.1% |
| 3898196 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 50.0 | 4.98e-01 | 100.0% | 90.9% |
| 5030632 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 42.0 | 4.43e-01 | 100.0% | 93.3% |
| 3629945 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.55 | 45.0 | 3.52e-01 | 100.0% | 41.7% |
| 5051919 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.55 | 49.0 | 4.18e-01 | 100.0% | 61.2% |
| 3782573 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.55 | 43.0 | 3.76e-01 | 100.0% | 56.2% |
| 4505111 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 47.0 | 4.65e-01 | 100.0% | 89.1% |
| 3311630 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.55 | 42.0 | 3.61e-01 | 100.0% | 51.1% |
| 3641037 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.54 | 42.0 | 3.68e-01 | 100.0% | 54.1% |
| 3779926 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.54 | 39.0 | 3.60e-01 | 100.0% | 57.5% |
| 3263784 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 38.0 | 2.72e-01 | 100.0% | 22.8% |
| 136413 | 375.1.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin | 0.53 | 47.0 | 4.53e-01 | 100.0% | 86.7% |
| 2429323 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 46.0 | 2.81e-01 | 100.0% | 14.7% |
| 3377397 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.53 | 37.0 | 3.45e-01 | 96.2% | 57.1% |
| 3349728 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 46.0 | 4.62e-01 | 100.0% | 96.3% |
| 4028716 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.52 | 47.0 | 3.43e-01 | 100.0% | 57.8% |
| 4020851 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 35.0 | 2.77e-01 | 71.2% | 31.5% |
| 4180999 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 37.0 | 3.91e-01 | 100.0% | 93.3% |
| 4410812 | 375.1.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin | 0.52 | 45.0 | 4.31e-01 | 100.0% | 88.3% |
| 3690656 | 376.1.1.15 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-Nse | 0.51 | 44.0 | 3.60e-01 | 100.0% | 52.0% |