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IMGVR_UViG_3300020364_000073-3300020364-Ga0211538_10056248
Arc-VirIMGVR_UViG_3300020364_000073-3300020364-Ga0211538_10056248
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 27-117
Domain cluster:
rep: SR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00148__D3-94
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lrqB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.66 | 35.0 | 3.74e-01 | 83.5% | 58.7% |
| 1przA02 | 6.10.140.230 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 30.0 | 3.93e-01 | 70.3% | 97.6% |
| 2kdoA02 | 1.10.10.900 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › SBDS protein C-terminal domain, subdomain 1 | 0.58 | 40.0 | 4.30e-01 | 72.5% | 94.5% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4938133 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.73 | 59.0 | 6.08e-01 | 85.7% | 91.8% |
| 3587782 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.53 | 44.0 | 4.16e-01 | 96.7% | 77.3% |
| 5075823 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 28.0 | 3.50e-01 | 79.1% | 87.3% |