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IMGVR_UViG_3300020386_000115-3300020386-Ga0211582_100045061
Arc-VirIMGVR_UViG_3300020386_000115-3300020386-Ga0211582_100045061
Identity
- Kingdom:
- archaea
Quality
86.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-73
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yjgA00 | 1.20.120.240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 | 0.56 | 43.0 | 3.30e-01 | 85.7% | 37.6% |
| 2nscA01 | 3.30.70.1050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain | 0.55 | 44.0 | 4.16e-01 | 90.5% | 82.1% |
| 7febA03 | 3.40.50.12790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 | 0.53 | 36.0 | 3.27e-01 | 71.4% | 75.0% |
| 2pmeA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 44.0 | 2.88e-01 | 100.0% | 39.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3675938 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.63 | 40.0 | 3.69e-01 | 81.0% | 50.0% |
| 3378291 | 109.4.1.2216 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, Eplus_motif | 0.59 | 41.0 | 2.42e-01 | 74.6% | 46.8% |
| 3989440 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.55 | 44.0 | 3.97e-01 | 88.9% | 97.8% |
| 5020992 | 101.1.2.728 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF31122 | 0.53 | 43.0 | 3.62e-01 | 92.1% | 100.0% |
| 1323408 | 3901.1.1.1 ↗ | a+b complex topology › Hypothetical protein lpg2422 after-hydrolase domain › Hypothetical protein lpg2422 after-hydrolase domain › Hypothetical protein lpg2422 after-hydrolase domain › DUF5621 | 0.51 | 36.0 | 2.81e-01 | 76.2% | 44.8% |
| 4832985 | 3050.1.1.7 ↗ | alpha bundles › Ribosomal protein L19 (L19e) C-terminal domain › Ribosomal protein L19 (L19e) C-terminal domain › Ribosomal protein L19 (L19e) C-terminal domain › Ribosomal_L19e_C | 0.50 | 43.0 | 3.53e-01 | 93.7% | 55.4% |