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IMGVR_UViG_3300020405_000960-3300020405-Ga0211496_100048697
Arc-VirIMGVR_UViG_3300020405_000960-3300020405-Ga0211496_100048697
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-112
Domain cluster:
rep: MH517022.1__AXF41541.1__SHAb15599_00190__00170__D10-84
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12322.15 best | T4_baseplate | 94.5 | 1.10e-26 | 100.0% | 43.8% |
D2
high
residues 123-204
Domain cluster:
rep: NC_048765.1__YP_009845671.1__HWC21_gp015__00015__D138-217
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12322.15 best | T4_baseplate | 62.4 | 7.50e-17 | 100.0% | 33.8% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hubG01 | 3.30.70.1730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein L10, N-terminal RNA-binding domain | 0.51 | 36.0 | 2.86e-01 | 74.4% | 63.2% |
| 3mq0B02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.50 | 40.0 | 3.27e-01 | 91.5% | 91.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3460631 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.67 | 44.0 | 3.64e-01 | 100.0% | 37.9% |
| 3455239 | 292.2.1.12 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Calmod_bind_C | 0.66 | 43.0 | 4.98e-01 | 100.0% | 91.7% |
| 3596580 | 5076.1.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier | 0.56 | 46.0 | 3.18e-01 | 90.2% | 90.7% |
| 3443593 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.55 | 36.0 | 3.54e-01 | 100.0% | 61.1% |
| 5039439 | 304.60.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10 | 0.55 | 39.0 | 2.93e-01 | 74.4% | 57.6% |
| 4593901 | 304.60.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10 | 0.55 | 39.0 | 2.96e-01 | 74.4% | 59.5% |
| 4948081 | 304.60.1.14 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › RL10P_insert | 0.54 | 39.0 | 2.91e-01 | 74.4% | 58.0% |
| 5036284 | 304.60.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10 | 0.54 | 38.0 | 2.88e-01 | 74.4% | 60.5% |
| 3713158 | 304.60.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10 | 0.54 | 37.0 | 2.76e-01 | 72.0% | 58.4% |