IMGVR_UViG_3300020455_001374-3300020455-Ga0211664_100139691

Arc-Vir

Identity

90.7 mean pLDDT

View cluster (6 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-160

PDB

Domain cluster: rep: CG10_big_fil_rev_8_21_14_0-10_scaffold_17_prodigal-single.1__X__X__00080__D4-138

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01743.27 best	PolyA_pol	114.3	6.60e-33	81.9%	97.6%

D2 high residues 376-417

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2go7A02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.65	47.0	4.07e-01	78.6%	49.3%

D3 medium residues 180-235

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1mivA02	1.10.110.30	Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein ›	0.90	78.0	6.38e-01	100.0%	54.2%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3786522	604.6.1.22 ↗	alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › EMC4	0.51	37.0	3.11e-01	82.1%	68.2%

D4 medium residues 236-368

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4x4wA02	1.10.3090.10	Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2	0.77	68.0	5.89e-01	98.5%	62.7%
3aqlA02	1.10.3090.10	Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2	0.71	64.0	5.16e-01	97.0%	69.4%
1zklA00	1.10.1300.10	Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain	0.68	60.0	4.51e-01	94.7%	85.8%
2dqbB00	1.10.3210.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432	0.60	51.0	3.77e-01	93.2%	56.4%
2ogiB00	1.10.3210.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432	0.59	52.0	4.60e-01	97.0%	93.8%
4cs9B02	1.20.120.1350	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain	0.51	29.0	3.20e-01	72.9%	66.4%
4uobA02	1.10.340.30	Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2	0.51	37.0	3.77e-01	75.2%	97.6%
5kbwB00	1.10.1760.20	Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 ›	0.51	38.0	3.52e-01	78.2%	88.3%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4511032	131.2.1.1 ↗	alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like › HD,PolyA_pol_RNAbd	0.83	78.0	5.84e-01	100.0%	71.7%
4444031	304.8.1.0 ↗	a+b two layers › Alpha-beta plaits › ACT-like › ACT-like	0.82	76.0	5.52e-01	100.0%	58.6%
4062451	131.2.1.5 ↗	alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like › HD, PF27444	0.81	75.0	5.48e-01	100.0%	59.4%
4582450	131.2.1.3 ↗	alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like › PolyA_pol_RNAbd	0.78	72.0	5.62e-01	100.0%	62.9%
4428969	131.2.1.3 ↗	alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like › PolyA_pol_RNAbd	0.70	63.0	5.01e-01	100.0%	64.4%