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IMGVR_UViG_3300020466_000318-3300020466-Ga0211714_100135571
Arc-VirIMGVR_UViG_3300020466_000318-3300020466-Ga0211714_100135571
Identity
- Kingdom:
- archaea
Quality
84.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 55-80_94-188
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7k98E03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.58 | 32.0 | 4.00e-01 | 91.7% | 94.1% |
| 1vdyA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 40.0 | 3.90e-01 | 76.0% | 70.0% |
| 4byfC01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.53 | 28.0 | 3.23e-01 | 94.2% | 67.4% |
| 2lnlA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 43.0 | 3.32e-01 | 95.0% | 90.2% |
| 4mp8A01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.50 | 38.0 | 3.51e-01 | 81.8% | 93.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4983836 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.68 | 57.0 | 5.94e-01 | 98.3% | 97.3% |
| 4326331 | 101.1.11.112 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › SGT1 | 0.60 | 53.0 | 5.24e-01 | 98.3% | 93.8% |
| 3600149 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.58 | 29.0 | 3.23e-01 | 91.7% | 58.0% |
| 3467706 | 101.1.11.112 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › SGT1 | 0.57 | 50.0 | 4.47e-01 | 98.3% | 71.4% |
| 3276107 | 626.1.1.0 ↗ | alpha complex topology › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) | 0.53 | 38.0 | 2.30e-01 | 75.2% | 10.0% |
| 3195747 | 3788.1.1.0 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) | 0.52 | 30.0 | 3.84e-01 | 100.0% | 98.6% |
| None | — | 0.50 | 41.0 | 3.02e-01 | 88.4% | 96.3% |